Information for 1-RGAACANNVTGTTCYT (Motif 1)

C T A G C T A G C G T A C G T A T A G C C G T A A T C G A C G T T G A C G C A T A T C G G C A T A G C T G T A C G A T C A C G T
Reverse Opposite:
T G C A C T A G C A T G T C G A C G T A A T G C C G T A A C T G G T C A T A G C G C A T A T C G G C A T C G A T G A T C G A T C
p-value:1e-343
log p-value:-7.911e+02
Information Content per bp:1.539
Number of Target Sequences with motif303.0
Percentage of Target Sequences with motif39.25%
Number of Background Sequences with motif632.2
Percentage of Background Sequences with motif1.38%
Average Position of motif in Targets54.6 +/- 23.2bp
Average Position of motif in Background48.9 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.99
Offset:0
Orientation:forward strand
Alignment:RGAACANNVTGTTCYT
AGNACAGNCTGTTCTN
 C T A G C T A G C G T A C G T A T A G C C G T A A T C G A C G T T G A C G C A T A T C G G C A T A G C T G T A C G A T C A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:RGAACANNVTGTTCYT
AGNACANNNTGTNCTN
 C T A G C T A G C G T A C G T A T A G C C G T A A T C G A C G T T G A C G C A T A T C G G C A T A G C T G T A C G A T C A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:RGAACANNVTGTTCYT
-GRACAGWMTGTYCTB
 C T A G C T A G C G T A C G T A T A G C C G T A A T C G A C G T T G A C G C A T A T C G G C A T A G C T G T A C G A T C A C G T
A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

NR3C2/MA0727.1/Jaspar

Match Rank:4
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-RGAACANNVTGTTCYT
GGGAACACAATGTTCCC
 A C G T C T A G C T A G C G T A C G T A T A G C C G T A A T C G A C G T T G A C G C A T A T C G G C A T A G C T G T A C G A T C A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:5
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-RGAACANNVTGTTCYT
NGGAACATNATGTACCC
 A C G T C T A G C T A G C G T A C G T A T A G C C G T A A T C G A C G T T G A C G C A T A T C G G C A T A G C T G T A C G A T C A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:6
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:RGAACANNVTGTTCYT
-GVACAGNMTGTYCTB
 C T A G C T A G C G T A C G T A T A G C C G T A A T C G A C G T T G A C G C A T A T C G G C A T A G C T G T A C G A T C A C G T
A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

Ar/MA0007.3/Jaspar

Match Rank:7
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-RGAACANNVTGTTCYT
NGGTACACNGTGTTCCC
 A C G T C T A G C T A G C G T A C G T A T A G C C G T A A T C G A C G T T G A C G C A T A T C G G C A T A G C T G T A C G A T C A C G T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:8
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:RGAACANNVTGTTCYT
-GAACADWATGTTCTT
 C T A G C T A G C G T A C G T A T A G C C G T A A T C G A C G T T G A C G C A T A T C G G C A T A G C T G T A C G A T C A C G T
A C G T C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---RGAACANNVTGTTCYT
CCAGGAACAG---------
 A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A G C C G T A A T C G A C G T T G A C G C A T A T C G G C A T A G C T G T A C G A T C A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:RGAACANNVTGTTCYT
AGGTCACCCTGACCT-
 C T A G C T A G C G T A C G T A T A G C C G T A A T C G A C G T T G A C G C A T A T C G G C A T A G C T G T A C G A T C A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T