Information for 7-GGAACAGAGC (Motif 5)

C T A G A C T G G C T A C G T A A T G C C T G A C T A G C G T A T A C G A G T C
Reverse Opposite:
C T A G A T G C G C A T A G T C G A C T A T C G C G A T C G A T A G T C A G T C
p-value:1e-17
log p-value:-3.987e+01
Information Content per bp:1.749
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.14%
Number of Background Sequences with motif414.3
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets56.3 +/- 24.8bp
Average Position of motif in Background50.2 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GGAACAGAGC
TGGAACAGMA-
 A C G T C T A G A C T G G C T A C G T A A T G C C T G A C T A G C G T A T A C G A G T C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GGAACAGAGC
CCAGGAACAG---
 A C G T A C G T A C G T C T A G A C T G G C T A C G T A A T G C C T G A C T A G C G T A T A C G A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGAACAGAGC
GGAACAAAGR
 C T A G A C T G G C T A C G T A A T G C C T G A C T A G C G T A T A C G A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGAACAGAGC
NGGATTAN---
 A C G T C T A G A C T G G C T A C G T A A T G C C T G A C T A G C G T A T A C G A G T C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGAACAGAGC
TGGAAAA----
 A C G T C T A G A C T G G C T A C G T A A T G C C T G A C T A G C G T A T A C G A G T C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGAACAGAGC
AGAGGAA------
 A C G T A C G T A C G T C T A G A C T G G C T A C G T A A T G C C T G A C T A G C G T A T A C G A G T C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGAACAGAGC
DCCGGAARYN---
 A C G T A C G T A C G T C T A G A C T G G C T A C G T A A T G C C T G A C T A G C G T A T A C G A G T C
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGAACAGAGC--
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T C T A G A C T G G C T A C G T A A T G C C T G A C T A G C G T A T A C G A G T C A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGAACAGAGC----
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T C T A G A C T G G C T A C G T A A T G C C T G A C T A G C G T A T A C G A G T C A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGAACAGAGC
GGGAGGACNG-
 A C G T C T A G A C T G G C T A C G T A A T G C C T G A C T A G C G T A T A C G A G T C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T