Information for 6-TCCKCCCCGGCACAGC (Motif 6)

A C G T A G T C A G T C A C G T T A G C A T G C A G T C A G T C A C T G A C T G A G T C C T G A A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A G C T A C T G T A G C G T A C C T A G A C T G A T C G A C T G T G A C A C T G A C T G C G T A
p-value:1e-13
log p-value:-3.133e+01
Information Content per bp:1.831
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 24.3bp
Average Position of motif in Background29.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.59
Offset:10
Orientation:reverse strand
Alignment:TCCKCCCCGGCACAGC
----------CACAGN
 A C G T A G T C A G T C A C G T T A G C A T G C A G T C A G T C A C T G A C T G A G T C C T G A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCCKCCCCGGCACAGC-
TACGCCCCGCCACTCTG
 A C G T A G T C A G T C A C G T T A G C A T G C A G T C A G T C A C T G A C T G A G T C C T G A A G T C C G T A A C T G A G T C A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCCKCCCCGGCACAGC
TCCGCCCCCGCATT--
 A C G T A G T C A G T C A C G T T A G C A T G C A G T C A G T C A C T G A C T G A G T C C T G A A G T C C G T A A C T G A G T C
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TCCKCCCCGGCACAGC
-----CCAGGAACAG-
 A C G T A G T C A G T C A C G T T A G C A T G C A G T C A G T C A C T G A C T G A G T C C T G A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TCCKCCCCGGCACAGC------
-------GAGCACAGCAGGACA
 A C G T A G T C A G T C A C G T T A G C A T G C A G T C A G T C A C T G A C T G A G T C C T G A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCCKCCCCGGCACAGC
ATCCCCGCCCCTAAAA---
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T T A G C A T G C A G T C A G T C A C T G A C T G A G T C C T G A A G T C C G T A A C T G A G T C
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TCCKCCCCGGCACAGC------
-------CCACACAGCAGGAGA
 A C G T A G T C A G T C A C G T T A G C A T G C A G T C A G T C A C T G A C T G A G T C C T G A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:TCCKCCCCGGCACAGC------
-------CCACACAGCAGGAGA
 A C G T A G T C A G T C A C G T T A G C A T G C A G T C A G T C A C T G A C T G A G T C C T G A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.53
Offset:12
Orientation:forward strand
Alignment:TCCKCCCCGGCACAGC-
------------CAGCC
 A C G T A G T C A G T C A C G T T A G C A T G C A G T C A G T C A C T G A C T G A G T C C T G A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCCKCCCCGGCACAGC
CCCCCGCCCCCGCC----
 A C G T A C G T A C G T A G T C A G T C A C G T T A G C A T G C A G T C A G T C A C T G A C T G A G T C C T G A A G T C C G T A A C T G A G T C
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T A C G T