Information for 4-TTCCATTGTTKGKTGG (Motif 5)

C A G T A C G T A G T C A G T C C T G A C A G T C G A T A C T G A G C T C G A T A C T G C T A G A C T G A G C T C A T G A C T G
Reverse Opposite:
A G T C G T A C T C G A T G A C A G T C G T A C C G T A C T G A G T A C C G T A G T C A A G C T C T A G C T A G C G T A G C T A
p-value:1e-15
log p-value:-3.569e+01
Information Content per bp:1.692
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.5 +/- 20.6bp
Average Position of motif in Background44.1 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0070.1_Sox30_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTCCATTGTTKGKTGG
ANNTCCATTGTTCNNN--
 A C G T A C G T C A G T A C G T A G T C A G T C C T G A C A G T C G A T A C T G A G C T C G A T A C T G C T A G A C T G A G C T C A T G A C T G
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TTCCATTGTTKGKTGG
--CCATTGTTYB----
 C A G T A C G T A G T C A G T C C T G A C A G T C G A T A C T G A G C T C G A T A C T G C T A G A C T G A G C T C A T G A C T G
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTCCATTGTTKGKTGG
--CCATTGTTC-----
 C A G T A C G T A G T C A G T C C T G A C A G T C G A T A C T G A G C T C G A T A C T G C T A G A C T G A G C T C A T G A C T G
A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TTCCATTGTTKGKTGG
----ATTGTTA-----
 C A G T A C G T A G T C A G T C C T G A C A G T C G A T A C T G A G C T C G A T A C T G C T A G A C T G A G C T C A T G A C T G
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTCCATTGTTKGKTGG
-NCCATTGTTC-----
 C A G T A C G T A G T C A G T C C T G A C A G T C G A T A C T G A G C T C G A T A C T G C T A G A C T G A G C T C A T G A C T G
A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTCCATTGTTKGKTGG
NNATNAATTGTTTNN---
 A C G T A C G T C A G T A C G T A G T C A G T C C T G A C A G T C G A T A C T G A G C T C G A T A C T G C T A G A C T G A G C T C A T G A C T G
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTCCATTGTTKGKTGG
CNNNTATTGTTCNNNNN
 A C G T C A G T A C G T A G T C A G T C C T G A C A G T C G A T A C T G A G C T C G A T A C T G C T A G A C T G A G C T C A T G A C T G
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTCCATTGTTKGKTGG
GTATCTATTGTTCTTTA-
 A C G T A C G T C A G T A C G T A G T C A G T C C T G A C A G T C G A T A C T G A G C T C G A T A C T G C T A G A C T G A G C T C A T G A C T G
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTCCATTGTTKGKTGG
-NCCATTGTTY-----
 C A G T A C G T A G T C A G T C C T G A C A G T C G A T A C T G A G C T C G A T A C T G C T A G A C T G A G C T C A T G A C T G
A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTCCATTGTTKGKTGG
----ATTGTT------
 C A G T A C G T A G T C A G T C C T G A C A G T C G A T A C T G A G C T C G A T A C T G C T A G A C T G A G C T C A T G A C T G
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T