Information for 13-CATTAGGAAC (Motif 43)

A G T C C G T A A C G T A C G T C G T A A C T G A C T G C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G T C A G T C A C G T C G T A C G T A A C G T A C T G
p-value:1e-3
log p-value:-7.570e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.7 +/- 3.9bp
Average Position of motif in Background53.1 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB3/MA0903.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATTAGGAAC
ACTAATTAGC---
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G C G T A C G T A A G T C
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CATTAGGAAC-------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATTAGGAAC
GCAATTAG----
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G C G T A C G T A A G T C
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T

PDX1/MA0132.2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATTAGGAAC
GTAATTAG----
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G C G T A C G T A A G T C
T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T

EMX1/MA0612.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CATTAGGAAC
NNTAATTAGN---
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G C G T A C G T A A G T C
T C A G A T C G G A C T G T C A G C T A G C A T A G C T C T G A C T A G A C T G A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATTAGGAAC---
TACCATAGCAACGGT
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G C G T A C G T A A G T C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

HOXB2/MA0902.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CATTAGGAAC
AGTAATTAAC---
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G C G T A C G T A A G T C
T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CATTAGGAAC
BCMATTAG----
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G C G T A C G T A A G T C
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATTAGGAAC-
-ANCAGGAAGT
 A G T C C G T A A C G T A C G T C G T A A C T G A C T G C G T A C G T A A G T C A C G T
A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

EVX2/MA0888.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CATTAGGAAC
GGTAATTAGC---
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G C G T A C G T A A G T C
T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C A C G T A C G T A C G T