Information for 20-WTGGAGCCMTCAG (Motif 34)

C G A T C G A T A C T G A T C G C G T A A C T G A G T C A G T C G T C A A C G T A G T C C G T A A C T G
Reverse Opposite:
G T A C A C G T A C T G C G T A C A G T A C T G A C T G A G T C A C G T A T G C G T A C C G T A G C T A
p-value:1e-8
log p-value:-1.852e+01
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.6 +/- 29.3bp
Average Position of motif in Background50.0 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----WTGGAGCCMTCAG
GRTGMTRGAGCC-----
 A C G T A C G T A C G T A C G T C G A T C G A T A C T G A T C G C G T A A C T G A G T C A G T C G T C A A C G T A G T C C G T A A C T G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:WTGGAGCCMTCAG
-CGGAGC------
 C G A T C G A T A C T G A T C G C G T A A C T G A G T C A G T C G T C A A C G T A G T C C G T A A C T G
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:WTGGAGCCMTCAG-
----GGCCATTAAC
 C G A T C G A T A C T G A T C G C G T A A C T G A G T C A G T C G T C A A C G T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:WTGGAGCCMTCAG
-TGGGGCCCAC--
 C G A T C G A T A C T G A T C G C G T A A C T G A G T C A G T C G T C A A C G T A G T C C G T A A C T G
A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----WTGGAGCCMTCAG
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T C G A T C G A T A C T G A T C G C G T A A C T G A G T C A G T C G T C A A C G T A G T C C G T A A C T G
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1/MA0024.3/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-WTGGAGCCMTCAG
TTTGGCGCCAAA--
 A C G T C G A T C G A T A C T G A T C G C G T A A C T G A G T C A G T C G T C A A C G T A G T C C G T A A C T G
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----WTGGAGCCMTCAG
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T C G A T C G A T A C T G A T C G C G T A A C T G A G T C A G T C G T C A A C G T A G T C C G T A A C T G
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:WTGGAGCCMTCAG------
-TGGACCAATCAGCACTCT
 C G A T C G A T A C T G A T C G C G T A A C T G A G T C A G T C G T C A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:WTGGAGCCMTCAG--
-----GCCATCTGTT
 C G A T C G A T A C T G A T C G C G T A A C T G A G T C A G T C G T C A A C G T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:WTGGAGCCMTCAG
---CAGCC-----
 C G A T C G A T A C T G A T C G C G T A A C T G A G T C A G T C G T C A A C G T A G T C C G T A A C T G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T