Information for 13-CTAACAGAACAAA (Motif 29)

G T A C A C G T C G T A G T C A G T A C C G T A A C T G C G T A C T G A A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A G C T A C G T G T A C A C G T A C T G A C G T A C G T C G T A A C T G
p-value:1e-8
log p-value:-2.065e+01
Information Content per bp:1.868
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.3 +/- 29.7bp
Average Position of motif in Background22.4 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTAACAGAACAAA------
--AGAAGAACAAAGGACTA
 G T A C A C G T C G T A G T C A G T A C C G T A A C T G C G T A C T G A A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTAACAGAACAAA---
-AAAAATAACAAACGG
 G T A C A C G T C G T A G T C A G T A C C G T A A C T G C G T A C T G A A G T C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTAACAGAACAAA---
AACACCAAAACAAAGGA
 A C G T G T A C A C G T C G T A G T C A G T A C C G T A A C T G C G T A C T G A A G T C C G T A C G T A C G T A A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTAACAGAACAAA------
--ATAAGAACAAAGGACTA
 G T A C A C G T C G T A G T C A G T A C C G T A A C T G C G T A C T G A A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTAACAGAACAAA---
ATATCAAAACAAAACA
 G T A C A C G T C G T A G T C A G T A C C G T A A C T G C G T A C T G A A G T C C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTAACAGAACAAA--
---AAAGATCAAAGG
 G T A C A C G T C G T A G T C A G T A C C G T A A C T G C G T A C T G A A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTAACAGAACAAA--
-----AAAACAAAGG
 G T A C A C G T C G T A G T C A G T A C C G T A A C T G C G T A C T G A A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTAACAGAACAAA-
CAAACAACAACACCT
 A C G T G T A C A C G T C G T A G T C A G T A C C G T A A C T G C G T A C T G A A G T C C G T A C G T A C G T A A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTAACAGAACAAA-----
---AAAGATCAAAGGGTT
 G T A C A C G T C G T A G T C A G T A C C G T A A C T G C G T A C T G A A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CTAACAGAACAAA--
-----GGAACAAAGR
 G T A C A C G T C G T A G T C A G T A C C G T A A C T G C G T A C T G A A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G