Information for 12-GCCTCCGTCGGAG (Motif 28)

A T C G A T G C A T G C A C G T G A T C G T A C A T C G A C G T A T G C A T C G A C T G T C G A A C T G
Reverse Opposite:
G T A C A G C T T A G C A T G C A T C G T G C A T A G C C A T G C A T G T C G A A T C G A T C G T A G C
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.673
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif73.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets43.5 +/- 31.6bp
Average Position of motif in Background44.0 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC4/MA0751.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCGTCGGAG-
GACCCCCCGCTGTGC
 A C G T A T C G A T G C A T G C A C G T G A T C G T A C A T C G A C G T A T G C A T C G A C T G T C G A A C T G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCGTCGGAG-
GGCCYCCTGCTGDGH
 A C G T A T C G A T G C A T G C A C G T G A T C G T A C A T C G A C G T A T G C A T C G A C T G T C G A A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCTCCGTCGGAG
-GCTCCG------
 A T C G A T G C A T G C A C G T G A T C G T A C A T C G A C G T A T G C A T C G A C T G T C G A A C T G
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCCTCCGTCGGAG--
-CCCCCCCGGGGGNN
 A T C G A T G C A T G C A C G T G A T C G T A C A T C G A C G T A T G C A T C G A C T G T C G A A C T G A C G T A C G T
A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCGTCGGAG-
GACCCCCCGCTGCGC
 A C G T A T C G A T G C A T G C A C G T G A T C G T A C A T C G A C G T A T G C A T C G A C T G T C G A A C T G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

GLIS2/MA0736.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCGTCGGAG
GACCCCCCGCGAAG
 A C G T A T C G A T G C A T G C A C G T G A T C G T A C A T C G A C G T A T G C A T C G A C T G T C G A A C T G
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCGTCGGAG
GACCCCCCGCTGTG
 A C G T A T C G A T G C A T G C A C G T G A T C G T A C A T C G A C G T A T G C A T C G A C T G T C G A A C T G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCCTCCGTCGGAG--
CCCCCCCGGGGGGGT
 A T C G A T G C A T G C A C G T G A T C G T A C A T C G A C G T A T G C A T C G A C T G T C G A A C T G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCCTCCGTCGGAG--
NCCCCCCCGGGGGGN
 A T C G A T G C A T G C A C G T G A T C G T A C A T C G A C G T A T G C A T C G A C T G T C G A A C T G A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCGTCGGAG
CGCCTCAGGCA---
 A C G T A T C G A T G C A T G C A C G T G A T C G T A C A T C G A C G T A T G C A T C G A C T G T C G A A C T G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T