Information for 20-ATTGATTAAACAKCTC (Motif 27)

C G T A G A C T A C G T A T C G C G T A A C G T G C A T G C T A G T C A C G T A A T G C C G T A A C T G G T A C A C G T A T G C
Reverse Opposite:
A T C G T G C A A C T G G T A C A C G T T A C G C G A T A C G T C A G T C G T A G T C A C G A T A T G C C G T A C G T A A C G T
p-value:1e-9
log p-value:-2.196e+01
Information Content per bp:1.724
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.0 +/- 30.6bp
Average Position of motif in Background67.5 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATTGATTAAACAKCTC
ATTGATTYND------
 C G T A G A C T A C G T A T C G C G T A A C G T G C A T G C T A G T C A C G T A A T G C C G T A A C T G G T A C A C G T A T G C
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATTGATTAAACAKCTC
TTCAATTGTTCTAAAA----
 A C G T A C G T A C G T A C G T C G T A G A C T A C G T A T C G C G T A A C G T G C A T G C T A G T C A C G T A A T G C C G T A A C T G G T A C A C G T A T G C
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATTGATTAAACAKCTC
ATTGTTTAN-------
 C G T A G A C T A C G T A T C G C G T A A C G T G C A T G C T A G T C A C G T A A T G C C G T A A C T G G T A C A C G T A T G C
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATTGATTAAACAKCTC
TAATTGATTA--------
 A C G T A C G T C G T A G A C T A C G T A T C G C G T A A C G T G C A T G C T A G T C A C G T A A T G C C G T A A C T G G T A C A C G T A T G C
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATTGATTAAACAKCTC
ATTGTTA---------
 C G T A G A C T A C G T A T C G C G T A A C G T G C A T G C T A G T C A C G T A A T G C C G T A A C T G G T A C A C G T A T G C
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATTGATTAAACAKCTC
NNNVCTGWGYAAACASN--
 A C G T A C G T A C G T C G T A G A C T A C G T A T C G C G T A A C G T G C A T G C T A G T C A C G T A A T G C C G T A A C T G G T A C A C G T A T G C
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATTGATTAAACAKCTC
NTATCGATTA--------
 A C G T A C G T C G T A G A C T A C G T A T C G C G T A A C G T G C A T G C T A G T C A C G T A A T G C C G T A A C T G G T A C A C G T A T G C
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATTGATTAAACAKCTC
CCATTGTTC---------
 A C G T A C G T C G T A G A C T A C G T A T C G C G T A A C G T G C A T G C T A G T C A C G T A A T G C C G T A A C T G G T A C A C G T A T G C
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ATTGATTAAACAKCTC
TTATCGATTA--------
 A C G T A C G T C G T A G A C T A C G T A T C G C G T A A C G T G C A T G C T A G T C A C G T A A T G C C G T A A C T G G T A C A C G T A T G C
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATTGATTAAACAKCTC
TAATTGTTCTAAAC----
 A C G T A C G T C G T A G A C T A C G T A T C G C G T A A C G T G C A T G C T A G T C A C G T A A T G C C G T A A C T G G T A C A C G T A T G C
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T A C G T A C G T