Information for 11-GYTRRCAAGMAGR (Motif 26)

A C T G A G T C A C G T C T G A C T A G A G T C C G T A C G T A A C T G G T C A C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A C G T A G T C A C G T A C G T A C T G G A C T A G C T C G T A C T A G T A G C
p-value:1e-9
log p-value:-2.196e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.2 +/- 9.3bp
Average Position of motif in Background39.7 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GYTRRCAAGMAGR
-TTGCCAAG----
 A C T G A G T C A C G T C T G A C T A G A G T C C G T A C G T A A C T G G T C A C G T A A C T G C T G A
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GYTRRCAAGMAGR
RHTGWCAR-----
 A C T G A G T C A C G T C T G A C T A G A G T C C G T A C G T A A C T G G T C A C G T A A C T G C T G A
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GYTRRCAAGMAGR-
NNNTAACAATTATAN
 A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A C G T A A C T G G T C A C G T A A C T G C T G A A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GYTRRCAAGMAGR
GGTGYTGACAGS----
 A C G T A C G T A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A C G T A A C T G G T C A C G T A A C T G C T G A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GYTRRCAAGMAGR
-TTTCCCAGAAN-
 A C T G A G T C A C G T C T G A C T A G A G T C C G T A C G T A A C T G G T C A C G T A A C T G C T G A
A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GYTRRCAAGMAGR
ARNTGACA------
 A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A C G T A A C T G G T C A C G T A A C T G C T G A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GYTRRCAAGMAGR
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A C G T A A C T G G T C A C G T A A C T G C T G A
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GYTRRCAAGMAGR
--TBGCACGCAA-
 A C T G A G T C A C G T C T G A C T A G A G T C C G T A C G T A A C T G G T C A C G T A A C T G C T G A
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GYTRRCAAGMAGR
GCTGTCAA-----
 A C T G A G T C A C G T C T G A C T A G A G T C C G T A C G T A A C T G G T C A C G T A A C T G C T G A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GYTRRCAAGMAGR-
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A C G T A A C T G G T C A C G T A A C T G C T G A A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T