Information for 10-AGCATTAAGATAG (Motif 25)

C G T A A C T G A G T C C G T A A C G T A C G T T C G A C G T A A C T G C G T A A G C T C T G A C T A G
Reverse Opposite:
A G T C A G C T C T G A A C G T A G T C A C G T A G C T C G T A C G T A A C G T A C T G A G T C A C G T
p-value:1e-9
log p-value:-2.196e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.4 +/- 29.8bp
Average Position of motif in Background56.2 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGCATTAAGATAG
NTAATTAATAT--
 C G T A A C T G A G T C C G T A A C G T A C G T T C G A C G T A A C T G C G T A A G C T C T G A C T A G
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AGCATTAAGATAG--
-------AGATAASR
 C G T A A C T G A G T C C G T A A C G T A C G T T C G A C G T A A C T G C G T A A G C T C T G A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGCATTAAGATAG
---ATTTGCATA-
 C G T A A C T G A G T C C G T A A C G T A C G T T C G A C G T A A C T G C G T A A G C T C T G A C T A G
A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGCATTAAGATAG
---ATTTGCATA-
 C G T A A C T G A G T C C G T A A C G T A C G T T C G A C G T A A C T G C G T A A G C T C T G A C T A G
A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCATTAAGATAG
NGGATTAA-----
 C G T A A C T G A G T C C G T A A C G T A C G T T C G A C G T A A C T G C G T A A G C T C T G A C T A G
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGCATTAAGATAG
VRGGATTARN----
 A C G T C G T A A C T G A G T C C G T A A C G T A C G T T C G A C G T A A C T G C G T A A G C T C T G A C T A G
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AGCATTAAGATAG--
-------AGATAAGA
 C G T A A C T G A G T C C G T A A C G T A C G T T C G A C G T A A C T G C G T A A G C T C T G A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AGCATTAAGATAG--
-------AGATAAGA
 C G T A A C T G A G T C C G T A A C G T A C G T T C G A C G T A A C T G C G T A A G C T C T G A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGCATTAAGATAG
GNGGATTAGN----
 A C G T C G T A A C T G A G T C C G T A A C G T A C G T T C G A C G T A A C T G C G T A A G C T C T G A C T A G
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AGCATTAAGATAG
TGAACCGGATTAATGAA-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T T C G A C G T A A C T G C G T A A G C T C T G A C T A G
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T