Information for 19-GAGGCCAGAGTGTGCC (Motif 24)

C T A G T G C A A C T G A C T G A G T C G T A C G T C A A T C G C T G A T C A G A C G T A T C G C G A T A T C G A G T C G A T C
Reverse Opposite:
C T A G A C T G A T G C C G T A T A G C G T C A A G T C G A C T T A G C A C G T A C T G T C A G A G T C A G T C A C G T A G T C
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.694
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif41.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets48.1 +/- 24.8bp
Average Position of motif in Background45.2 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGGCCAGAGTGTGCC
-AGGTCACCCTGACCT
 C T A G T G C A A C T G A C T G A G T C G T A C G T C A A T C G C T G A T C A G A C G T A T C G C G A T A T C G A G T C G A T C
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAGGCCAGAGTGTGCC
NAGGTCACNNTGACC-
 C T A G T G C A A C T G A C T G A G T C G T A C G T C A A T C G C T G A T C A G A C G T A T C G C G A T A T C G A G T C G A T C
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAGGCCAGAGTGTGCC
NAGAACAGNCTGTNCT
 C T A G T G C A A C T G A C T G A G T C G T A C G T C A A T C G C T G A T C A G A C G T A T C G C G A T A T C G A G T C G A T C
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

ESR1/MA0112.3/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAGGCCAGAGTGTGCC-
CAGGTCACCGTGACCTT
 C T A G T G C A A C T G A C T G A G T C G T A C G T C A A T C G C T G A T C A G A C G T A T C G C G A T A T C G A G T C G A T C A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGGCCAGAGTGTGCC
TRAGGTCA---------
 A C G T C T A G T G C A A C T G A C T G A G T C G T A C G T C A A T C G C T G A T C A G A C G T A T C G C G A T A T C G A G T C G A T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGGCCAGAGTGTGCC
NAGNACANNNTGTNCT
 C T A G T G C A A C T G A C T G A G T C G T A C G T C A A T C G C T G A T C A G A C G T A T C G C G A T A T C G A G T C G A T C
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGGCCAGAGTGTGCC---
NGAGGTCANNGAGTTCANNN
 A C G T C T A G T G C A A C T G A C T G A G T C G T A C G T C A A T C G C T G A T C A G A C G T A T C G C G A T A T C G A G T C G A T C A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGGCCAGAGTGTGCC
AGRGGTCA---------
 A C G T C T A G T G C A A C T G A C T G A G T C G T A C G T C A A T C G C T G A T C A G A C G T A T C G C G A T A T C G A G T C G A T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGGCCAGAGTGTGCC
CAAAGGTCAG--------
 A C G T A C G T C T A G T G C A A C T G A C T G A G T C G T A C G T C A A T C G C T G A T C A G A C G T A T C G C G A T A T C G A G T C G A T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGGCCAGAGTGTGCC-
GGGAACACGGTGTACCC
 C T A G T G C A A C T G A C T G A G T C G T A C G T C A A T C G C T G A T C A G A C G T A T C G C G A T A T C G A G T C G A T C A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C