Information for 9-GCCAGSCCTTCGA (Motif 21)

A T C G A G T C A G T C C G T A A C T G A T G C A G T C A G T C A G C T C A G T G T A C A C T G C G T A
Reverse Opposite:
A C G T T G A C C A T G G T C A C T G A A C T G A C T G A T C G A G T C A C G T A C T G T C A G A T G C
p-value:1e-10
log p-value:-2.327e+01
Information Content per bp:1.793
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.3 +/- 23.6bp
Average Position of motif in Background57.7 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GCCAGSCCTTCGA
-CNAGGCCT----
 A T C G A G T C A G T C C G T A A C T G A T G C A G T C A G T C A G C T C A G T G T A C A C T G C G T A
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCCAGSCCTTCGA
-CTAGGCCT----
 A T C G A G T C A G T C C G T A A C T G A T G C A G T C A G T C A G C T C A G T G T A C A C T G C G T A
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCAGSCCTTCGA
NNGGCCACGCCTTTN-
 A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C T G A T G C A G T C A G T C A G C T C A G T G T A C A C T G C G T A
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCCAGSCCTTCGA
GGGGCCGAGGCCTG---
 A C G T A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C T G A T G C A G T C A G T C A G C T C A G T G T A C A C T G C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCCAGSCCTTCGA
CACAGN-------
 A T C G A G T C A G T C C G T A A C T G A T G C A G T C A G T C A G C T C A G T G T A C A C T G C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGSCCTTCGA
ATGCCAGACN-----
 A C G T A C G T A T C G A G T C A G T C C G T A A C T G A T G C A G T C A G T C A G C T C A G T G T A C A C T G C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCCAGSCCTTCGA---
------CCTTTGAWGT
 A T C G A G T C A G T C C G T A A C T G A T G C A G T C A G T C A G C T C A G T G T A C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCCAGSCCTTCGA
--CTGACCTTTG-
 A T C G A G T C A G T C C G T A A C T G A T G C A G T C A G T C A G C T C A G T G T A C A C T G C G T A
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCCAGSCCTTCGA------
--AATCCCTTTGATCTATC
 A T C G A G T C A G T C C G T A A C T G A T G C A G T C A G T C A G C T C A G T G T A C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GCCAGSCCTTCGA---
------CCTTTGATGT
 A T C G A G T C A G T C C G T A A C T G A T G C A G T C A G T C A G C T C A G T G T A C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T