Information for 15-GAGCTTCAGGAACAAC (Motif 19)

A T C G C G T A A C T G T G A C A C G T A G C T A T G C C G T A C T A G C T A G C G T A C G T A A G T C G T C A C G T A T G A C
Reverse Opposite:
A C T G A C G T A C G T T A C G G A C T G C A T A G T C G A T C G C A T T A C G C T G A C G T A A C T G A G T C G C A T T A G C
p-value:1e-10
log p-value:-2.450e+01
Information Content per bp:1.659
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif57.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets42.9 +/- 22.3bp
Average Position of motif in Background47.6 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:GAGCTTCAGGAACAAC--
--------GGAACAAAGR
 A T C G C G T A A C T G T G A C A C G T A G C T A T G C C G T A C T A G C T A G C G T A C G T A A G T C G T C A C G T A T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAGCTTCAGGAACAAC-----
-----TTAAGAACAATAAATT
 A T C G C G T A A C T G T G A C A C G T A G C T A T G C C G T A C T A G C T A G C G T A C G T A A G T C G T C A C G T A T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GAGCTTCAGGAACAAC
-----CCAGGAACAG-
 A T C G C G T A A C T G T G A C A C G T A G C T A T G C C G T A C T A G C T A G C G T A C G T A A G T C G T C A C G T A T G A C
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GAGCTTCAGGAACAAC--
--------RNAACAATGG
 A T C G C G T A A C T G T G A C A C G T A G C T A T G C C G T A C T A G C T A G C G T A C G T A A G T C G T C A C G T A T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GAGCTTCAGGAACAAC------
-----ATAAGAACAAAGGACTA
 A T C G C G T A A C T G T G A C A C G T A G C T A T G C C G T A C T A G C T A G C G T A C G T A A G T C G T C A C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GAGCTTCAGGAACAAC-----
-----TTTAGAACAATAAAAT
 A T C G C G T A A C T G T G A C A C G T A G C T A T G C C G T A C T A G C T A G C G T A C G T A A G T C G T C A C G T A T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GAGCTTCAGGAACAAC------
-----AGAAGAACAAAGGACTA
 A T C G C G T A A C T G T G A C A C G T A G C T A T G C C G T A C T A G C T A G C G T A C G T A A G T C G T C A C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GAGCTTCAGGAACAAC--
----TACTGGAAAAAAAA
 A T C G C G T A A C T G T G A C A C G T A G C T A T G C C G T A C T A G C T A G C G T A C G T A A G T C G T C A C G T A T G A C A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GAGCTTCAGGAACAAC-----
----NNNNNGAACAATTGANN
 A T C G C G T A A C T G T G A C A C G T A G C T A T G C C G T A C T A G C T A G C G T A C G T A A G T C G T C A C G T A T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GAGCTTCAGGAACAAC------
-----TAGTGAACAATAGATTT
 A T C G C G T A A C T G T G A C A C G T A G C T A T G C C G T A C T A G C T A G C G T A C G T A A G T C G T C A C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T