Information for 3-TGCCAACTCT (Motif 13)

G A C T T C A G A G T C A G T C C G T A C T G A T G A C A C G T A G T C G A C T
Reverse Opposite:
C G T A C T A G G T C A A C T G G A C T A C G T A C T G A C T G A G T C C T G A
p-value:1e-11
log p-value:-2.560e+01
Information Content per bp:1.825
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif126.8
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets53.1 +/- 23.4bp
Average Position of motif in Background47.4 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-TGCCAACTCT
ATGCCAACC--
 A C G T G A C T T C A G A G T C A G T C C G T A C T G A T G A C A C G T A G T C G A C T
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TGCCAACTCT
GGTGCCAAGT--
 A C G T A C G T G A C T T C A G A G T C A G T C C G T A C T G A T G A C A C G T A G T C G A C T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TGCCAACTCT
CGTGCCAAG---
 A C G T A C G T G A C T T C A G A G T C A G T C C G T A C T G A T G A C A C G T A G T C G A C T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGCCAACTCT
TGCCAA----
 G A C T T C A G A G T C A G T C C G T A C T G A T G A C A C G T A G T C G A C T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGCCAACTCT
TTGCCAAG---
 A C G T G A C T T C A G A G T C A G T C C G T A C T G A T G A C A C G T A G T C G A C T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TGCCAACTCT--
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C G T G A C T T C A G A G T C A G T C C G T A C T G A T G A C A C G T A G T C G A C T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCCAACTCT
ATGCCCACC--
 A C G T G A C T T C A G A G T C A G T C C G T A C T G A T G A C A C G T A G T C G A C T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCCAACTCT
TGTCANYT--
 G A C T T C A G A G T C A G T C C G T A C T G A T G A C A C G T A G T C G A C T
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGCCAACTCT-
-GCCATCTGTT
 G A C T T C A G A G T C A G T C C G T A C T G A T G A C A C G T A G T C G A C T A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCCAACTCT----
CGACCAACTGCCGTG
 A C G T G A C T T C A G A G T C A G T C C G T A C T G A T G A C A C G T A G T C G A C T A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G