Information for 1-RRGAACABWVTGTNCY (Motif 1)

C T G A C T G A C A T G C T G A G C T A A T G C G C T A A G T C C G T A T A C G G C A T A T C G C G A T A C G T G A T C G A C T
Reverse Opposite:
C T G A C T A G G T C A G C T A A T G C C G T A A T G C G C A T T C A G C G A T A T C G C G A T G A C T G T A C G A C T A G C T
p-value:1e-119
log p-value:-2.762e+02
Information Content per bp:1.521
Number of Target Sequences with motif146.0
Percentage of Target Sequences with motif19.95%
Number of Background Sequences with motif599.2
Percentage of Background Sequences with motif1.33%
Average Position of motif in Targets53.6 +/- 21.9bp
Average Position of motif in Background51.6 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:RRGAACABWVTGTNCY
NAGAACAGNCTGTNCT
 C T G A C T G A C A T G C T G A G C T A A T G C G C T A A G T C C G T A T A C G G C A T A T C G C G A T A C G T G A T C G A C T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:RRGAACABWVTGTNCY
NAGNACANNNTGTNCT
 C T G A C T G A C A T G C T G A G C T A A T G C G C T A A G T C C G T A T A C G G C A T A T C G C G A T A C G T G A T C G A C T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:RRGAACABWVTGTNCY-
--GRACAGWMTGTYCTB
 C T G A C T G A C A T G C T G A G C T A A T G C G C T A A G T C C G T A T A C G G C A T A T C G C G A T A C G T G A T C G A C T A C G T
A C G T A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:RRGAACABWVTGTNCY-
--GVACAGNMTGTYCTB
 C T G A C T G A C A T G C T G A G C T A A T G C G C T A A G T C C G T A T A C G G C A T A T C G C G A T A C G T G A T C G A C T A C G T
A C G T A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.92
Offset:0
Orientation:forward strand
Alignment:RRGAACABWVTGTNCY
AAGAACATWHTGTTC-
 C T G A C T G A C A T G C T G A G C T A A T G C G C T A A G T C C G T A T A C G G C A T A T C G C G A T A C G T G A T C G A C T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.92
Offset:0
Orientation:forward strand
Alignment:RRGAACABWVTGTNCY-
GGGAACACAATGTTCCC
 C T G A C T G A C A T G C T G A G C T A A T G C G C T A A G T C C G T A T A C G G C A T A T C G C G A T A C G T G A T C G A C T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.92
Offset:0
Orientation:forward strand
Alignment:RRGAACABWVTGTNCY-
GGGTACATAATGTTCCC
 C T G A C T G A C A T G C T G A G C T A A T G C G C T A A G T C C G T A T A C G G C A T A T C G C G A T A C G T G A T C G A C T A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.92
Offset:0
Orientation:forward strand
Alignment:RRGAACABWVTGTNCY-
GGGAACACGGTGTACCC
 C T G A C T G A C A T G C T G A G C T A A T G C G C T A A G T C C G T A T A C G G C A T A T C G C G A T A C G T G A T C G A C T A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RRGAACABWVTGTNCY
CCAGGAACAG--------
 A C G T A C G T C T G A C T G A C A T G C T G A G C T A A T G C G C T A A G T C C G T A T A C G G C A T A T C G C G A T A C G T G A T C G A C T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-RRGAACABWVTGTNCY---
NGAGGTCANNGAGTTCANNN
 A C G T C T G A C T G A C A T G C T G A G C T A A T G C G C T A A G T C C G T A T A C G G C A T A T C G C G A T A C G T G A T C G A C T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G