Information for 2-CTGGGAACAGAGCCAG (Motif 8)

A G T C A C G T A C T G A C T G A C T G G T C A G T C A A T G C C G T A C T A G T C G A A C T G A T G C A G T C G T C A A C T G
Reverse Opposite:
A G T C A C G T A C T G A T C G A G T C A G C T A G T C A C G T A T C G C A G T A C G T A G T C A G T C A G T C C G T A A C T G
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.842
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.7 +/- 24.6bp
Average Position of motif in Background62.2 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTGGGAACAGAGCCAG
CTTGGCANNNTGCCAA
 A G T C A C G T A C T G A C T G A C T G G T C A G T C A A T G C C G T A C T A G T C G A A C T G A T G C A G T C G T C A A C T G
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CTGGGAACAGAGCCAG
WDNCTGGGCA---------
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G G T C A G T C A A T G C C G T A C T A G T C G A A C T G A T G C A G T C G T C A A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGAACAGAGCCAG
CSTGGGAAAD-------
 A C G T A G T C A C G T A C T G A C T G A C T G G T C A G T C A A T G C C G T A C T A G T C G A A C T G A T G C A G T C G T C A A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGGGAACAGAGCCAG---
--GGGRAARRGRMCAGMTG
 A G T C A C G T A C T G A C T G A C T G G T C A G T C A A T G C C G T A C T A G T C G A A C T G A T G C A G T C G T C A A C T G A C G T A C G T A C G T
A C G T A C G T C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTGGGAACAGAGCCAG
--TGGCAGNCTGCCAG
 A G T C A C G T A C T G A C T G A C T G G T C A G T C A A T G C C G T A C T A G T C G A A C T G A T G C A G T C G T C A A C T G
A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTGGGAACAGAGCCAG
--TGGAACAGMA----
 A G T C A C G T A C T G A C T G A C T G G T C A G T C A A T G C C G T A C T A G T C G A A C T G A T G C A G T C G T C A A C T G
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTGGGAACAGAGCCAG
---GGAACAAAGR---
 A G T C A C G T A C T G A C T G A C T G G T C A G T C A A T G C C G T A C T A G T C G A A C T G A T G C A G T C G T C A A C T G
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGGGAACAGAGCCAG
CCAGGAACAG------
 A G T C A C G T A C T G A C T G A C T G G T C A G T C A A T G C C G T A C T A G T C G A A C T G A T G C A G T C G T C A A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGGGAACAGAGCCAG
-TTGGCATGGTGCCA-
 A G T C A C G T A C T G A C T G A C T G G T C A G T C A A T G C C G T A C T A G T C G A A C T G A T G C A G T C G T C A A C T G
A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTGGGAACAGAGCCAG
-TGGGGCAAAGGTCA-
 A G T C A C G T A C T G A C T G A C T G G T C A G T C A A T G C C G T A C T A G T C G A A C T G A T G C A G T C G T C A A C T G
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T