Information for 4-GCACGCACGCAGT (Motif 5)

A T C G A T G C C G T A A G T C A C T G A T G C C G T A A T G C A C T G A G T C C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C T G G T A C A T C G A C G T A T C G A G T C A C T G A C G T A T C G A T G C
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.2 +/- 19.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCACGCACGCAGT
--TBGCACGCAA-
 A T C G A T G C C G T A A G T C A C T G A T G C C G T A A T G C A C T G A G T C C G T A A C T G A C G T
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCACGCACGCAGT
-CRCCCACGCA--
 A T C G A T G C C G T A A G T C A C T G A T G C C G T A A T G C A C T G A G T C C G T A A C T G A C G T
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCACGCACGCAGT
AGCGGCACACACGCAA-
 A C G T A C G T A C G T A C G T A T C G A T G C C G T A A G T C A C T G A T G C C G T A A T G C A C T G A G T C C G T A A C T G A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCACGCACGCAGT
-CACGCA------
 A T C G A T G C C G T A A G T C A C T G A T G C C G T A A T G C A C T G A G T C C G T A A C T G A C G T
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCACGCACGCAGT
GCACGTACCC---
 A T C G A T G C C G T A A G T C A C T G A T G C C G T A A T G C A C T G A G T C C G T A A C T G A C G T
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCACGCACGCAGT
GCACGTNC-----
 A T C G A T G C C G T A A G T C A C T G A T G C C G T A A T G C A C T G A G T C C G T A A C T G A C G T
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCACGCACGCAGT
ACGCCCACGCA--
 A T C G A T G C C G T A A G T C A C T G A T G C C G T A A T G C A C T G A G T C C G T A A C T G A C G T
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCACGCACGCAGT
GCACGTAY-----
 A T C G A T G C C G T A A G T C A C T G A T G C C G T A A T G C A C T G A G T C C G T A A C T G A C G T
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T

EGR4/MA0733.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCACGCACGCAGT-
TTACGCCCACGCATTT
 A C G T A C G T A T C G A T G C C G T A A G T C A C T G A T G C C G T A A T G C A C T G A G T C C G T A A C T G A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

EGR3/MA0732.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCACGCACGCAGT
CTACGCCCACGCACT
 A C G T A C G T A T C G A T G C C G T A A G T C A C T G A T G C C G T A A T G C A C T G A G T C C G T A A C T G A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T