Information for 10-CCGCGTGGCCTTT (Motif 20)

A G T C A G T C A C T G A G T C A C T G A G C T A C T G A C T G A G T C A G T C A C G T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A A C T G A C T G A G T C A G T C C T G A A G T C A C T G A G T C C T A G A C T G
p-value:1e-8
log p-value:-1.930e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.2 +/- 11.1bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCGCGTGGCCTTT----
-NNNGTGACCTTTGNNN
 A G T C A G T C A C T G A G T C A C T G A G C T A C T G A C T G A G T C A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCGCGTGGCCTTT----
-NNNNTGACCTTTNNNN
 A G T C A G T C A C T G A G T C A C T G A G C T A C T G A C T G A G T C A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CCGCGTGGCCTTT
----GTGACCTT-
 A G T C A G T C A C T G A G T C A C T G A G C T A C T G A C T G A G T C A G T C A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCGCGTGGCCTTT
GGGGCCGAGGCCTG-
 A C G T A C G T A G T C A G T C A C T G A G T C A C T G A G C T A C T G A C T G A G T C A G T C A C G T A G C T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCGCGTGGCCTTT
-TGCGTG------
 A G T C A G T C A C T G A G T C A C T G A G C T A C T G A C T G A G T C A G T C A C G T A G C T A C G T
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCGCGTGGCCTTT
---BNTGDCCTTG
 A G T C A G T C A C T G A G T C A C T G A G C T A C T G A C T G A G T C A G T C A C G T A G C T A C G T
A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGCGTGGCCTTT
NNCGCGTGNN----
 A C G T A G T C A G T C A C T G A G T C A C T G A G C T A C T G A C T G A G T C A G T C A C G T A G C T A C G T
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CCGCGTGGCCTTT-
----CTGACCTTTG
 A G T C A G T C A C T G A G T C A C T G A G C T A C T G A C T G A G T C A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCGCGTGGCCTTT-
-CNNTTGACCTTTG
 A G T C A G T C A C T G A G T C A C T G A G C T A C T G A C T G A G T C A G T C A C G T A G C T A C G T A C G T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CCGCGTGGCCTTT----
-----TGACCTTTNCNT
 A G T C A G T C A C T G A G T C A C T G A G C T A C T G A C T G A G T C A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T