Information for 8-ACCAGCAGAGGAT (Motif 17)

C T G A G T A C G T A C C G T A A C T G A G T C C G T A A T C G C G T A A C T G A C T G C G T A A C G T
Reverse Opposite:
G T C A A C G T A G T C A G T C A C G T A T G C A C G T A C T G A G T C A C G T A C T G A C T G A G C T
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 18.0bp
Average Position of motif in Background37.4 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACCAGCAGAGGAT
CACAGCAGGGGG-
 C T G A G T A C G T A C C G T A A C T G A G T C C G T A A T C G C G T A A C T G A C T G C G T A A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACCAGCAGAGGAT----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T C T G A G T A C G T A C C G T A A C T G A G T C C G T A A T C G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACCAGCAGAGGAT
ANCAGCTG-----
 C T G A G T A C G T A C C G T A A C T G A G T C C G T A A T C G C G T A A C T G A C T G C G T A A C G T
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACCAGCAGAGGAT
AACAGCTGAT---
 C T G A G T A C G T A C C G T A A C T G A G T C C G T A A T C G C G T A A C T G A C T G C G T A A C G T
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ACCAGCAGAGGAT
---AACAGATGGT
 C T G A G T A C G T A C C G T A A C T G A G T C C G T A A T C G C G T A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ACCAGCAGAGGAT
NAHCAGCTGD----
 A C G T C T G A G T A C G T A C C G T A A C T G A G T C C G T A A T C G C G T A A C T G A C T G C G T A A C G T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ACCAGCAGAGGAT--
---AACAGATGGTCN
 C T G A G T A C G T A C C G T A A C T G A G T C C G T A A T C G C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACCAGCAGAGGAT-------
GCCASCAGGGGGCGCYVNNG
 C T G A G T A C G T A C C G T A A C T G A G T C C G T A A T C G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:ACCAGCAGAGGAT
------AGAGGAA
 C T G A G T A C G T A C C G T A A C T G A G T C C G T A A T C G C G T A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ACCAGCAGAGGAT---
-----AAGAGGATTAG
 C T G A G T A C G T A C C G T A A C T G A G T C C G T A A T C G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G