Information for 3-ACTAGACATG (Motif 10)

C G T A A G T C C G A T C G T A C T A G G T C A A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C G T C A A C G T C T A G A C G T A G T C A C G T C G T A T C A G A C G T
p-value:1e-9
log p-value:-2.288e+01
Information Content per bp:1.866
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.6 +/- 24.0bp
Average Position of motif in Background37.3 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ACTAGACATG--
NNAATTAGTCACGGT
 A C G T A C G T A C G T C G T A A G T C C G A T C G T A C T A G G T C A A G T C C G T A A C G T A C T G A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACTAGACATG---
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T C G T A A G T C C G A T C G T A C T A G G T C A A G T C C G T A A C G T A C T G A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACTAGACATG
CGTCTAGACA--
 A C G T A C G T C G T A A G T C C G A T C G T A C T A G G T C A A G T C C G T A A C G T A C T G
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACTAGACATG
-BCAGACWA-
 C G T A A G T C C G A T C G T A C T A G G T C A A G T C C G T A A C G T A C T G
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACTAGACATG-------
AATATACATGTAAAATT
 C G T A A G T C C G A T C G T A C T A G G T C A A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACTAGACATG
-CCAGACAG-
 C G T A A G T C C G A T C G T A C T A G G T C A A G T C C G T A A C G T A C T G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACTAGACATG-
-CCAGACRSVB
 C G T A A G T C C G A T C G T A C T A G G T C A A G T C C G T A A C G T A C T G A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACTAGACATG-------
TAAATACATGTAAAATT
 C G T A A G T C C G A T C G T A C T A G G T C A A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACTAGACATG-------
AATATACATGTAAAACA
 C G T A A G T C C G A T C G T A C T A G G T C A A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

FOXD1/MA0031.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACTAGACATG
-GTAAACAT-
 C G T A A G T C C G A T C G T A C T A G G T C A A G T C C G T A A C G T A C T G
A C G T A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T A C G T