Information for 8-CTGACTGGCTGGC (Motif 9)

A G T C A C G T A C T G C G T A A G T C A C G T A C T G C T A G A T G C A C G T C T A G A T C G A G T C
Reverse Opposite:
A C T G A T G C A G T C C G T A A T C G A G T C A G T C C G T A A C T G A C G T A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.537e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 28.9bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGACTGGCTGGC
-TGAGTGACAGSC
 A G T C A C G T A C T G C G T A A G T C A C G T A C T G C T A G A T G C A C G T C T A G A T C G A G T C
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTGACTGGCTGGC
BTGABTGACAGS-
 A G T C A C G T A C T G C G T A A G T C A C G T A C T G C T A G A T G C A C G T C T A G A T C G A G T C
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGACTGGCTGGC-
CTGGCAGNCTGCCA
 A G T C A C G T A C T G C G T A A G T C A C G T A C T G C T A G A T G C A C G T C T A G A T C G A G T C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGACTGGCTGGC--
CTGATTGGTCNATTT
 A G T C A C G T A C T G C G T A A G T C A C G T A C T G C T A G A T G C A C G T C T A G A T C G A G T C A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGACTGGCTGGC
-TGATTGGCTANN
 A G T C A C G T A C T G C G T A A G T C A C G T A C T G C T A G A T G C A C G T C T A G A T C G A G T C
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGACTGGCTGGC
NTGATTGACAGN-
 A G T C A C G T A C T G C G T A A G T C A C G T A C T G C T A G A T G C A C G T C T A G A T C G A G T C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTGACTGGCTGGC
CCGATTGGCT---
 A G T C A C G T A C T G C G T A A G T C A C G T A C T G C T A G A T G C A C G T C T A G A T C G A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGACTGGCTGGC
CTGTCTGG-----
 A G T C A C G T A C T G C G T A A G T C A C G T A C T G C T A G A T G C A C G T C T A G A T C G A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CTGACTGGCTGGC
AGAGTGCTGATTGGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C T G C T A G A T G C A C G T C T A G A T C G A G T C
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGACTGGCTGGC
TGCTGACTCA-----
 A C G T A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C T G C T A G A T G C A C G T C T A G A T C G A G T C
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T