Information for 13-TTCYRTTSYTGGG (Motif 21)

A C G T A C G T A G T C A G C T T C A G A C G T A C G T A T C G G A C T A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A C T G A A T G C C G T A C G T A A G T C C T G A A C T G C G T A C G T A
p-value:1e-5
log p-value:-1.208e+01
Information Content per bp:1.874
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 27.7bp
Average Position of motif in Background18.0 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTCYRTTSYTGGG
--CTATTTTTGG-
 A C G T A C G T A G T C A G C T T C A G A C G T A C G T A T C G G A C T A C G T A C T G A C T G A C T G
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTCYRTTSYTGGG--
TTCTATTTTTAGNNN
 A C G T A C G T A G T C A G C T T C A G A C G T A C G T A T C G G A C T A C G T A C T G A C T G A C T G A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MF0008.1_MADS_class/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTCYRTTSYTGGG
--CCATATATGG-
 A C G T A C G T A G T C A G C T T C A G A C G T A C G T A T C G G A C T A C G T A C T G A C T G A C T G
A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTCYRTTSYTGGG-
--CTGTTGCTAGGS
 A C G T A C G T A G T C A G C T T C A G A C G T A C G T A T C G G A C T A C G T A C T G A C T G A C T G A C G T
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTCYRTTSYTGGG
-GCTATTTTTGGM
 A C G T A C G T A G T C A G C T T C A G A C G T A C G T A T C G G A C T A C G T A C T G A C T G A C T G
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTCYRTTSYTGGG
AGTTTCAKTTTC----
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T T C A G A C G T A C G T A T C G G A C T A C G T A C T G A C T G A C T G
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTCYRTTSYTGGG
--CTGTTCCTGG-
 A C G T A C G T A G T C A G C T T C A G A C G T A C G T A T C G G A C T A C G T A C T G A C T G A C T G
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTCYRTTSYTGGG
GTTTCACTTCCG---
 A C G T A C G T A C G T A C G T A G T C A G C T T C A G A C G T A C G T A T C G G A C T A C G T A C T G A C T G A C T G
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTCYRTTSYTGGG---
-NCCGTTGCTANGNGN
 A C G T A C G T A G T C A G C T T C A G A C G T A C G T A T C G G A C T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTCYRTTSYTGGG
ATTTTCCATT------
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T T C A G A C G T A C G T A T C G G A C T A C G T A C T G A C T G A C T G
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T