Information for 9-CTCATAAAAC (Motif 14)

A G T C C G A T G A T C G T C A G C A T T G C A T G C A G T C A C G T A T G A C
Reverse Opposite:
A C T G G C A T A C G T A C G T A C G T C G T A C A G T C T A G G C T A T C A G
p-value:1e-9
log p-value:-2.133e+01
Information Content per bp:1.660
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.50%
Number of Background Sequences with motif355.4
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets47.6 +/- 25.1bp
Average Position of motif in Background51.3 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CTCATAAAAC
CCYMATAAAA-
 A C G T A G T C C G A T G A T C G T C A G C A T T G C A T G C A G T C A C G T A T G A C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CTCATAAAAC
NCYAATAAAA-
 A C G T A G T C C G A T G A T C G T C A G C A T T G C A T G C A G T C A C G T A T G A C
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----CTCATAAAAC--
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C C G A T G A T C G T C A G C A T T G C A T G C A G T C A C G T A T G A C A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-CTCATAAAAC
GCTCGTAAAAA
 A C G T A G T C C G A T G A T C G T C A G C A T T G C A T G C A G T C A C G T A T G A C
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CTCATAAAAC
CCAATAAAAA
 A G T C C G A T G A T C G T C A G C A T T G C A T G C A G T C A C G T A T G A C
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----CTCATAAAAC--
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C C G A T G A T C G T C A G C A T T G C A T G C A G T C A C G T A T G A C A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXC10/MA0905.1/Jaspar

Match Rank:7
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CTCATAAAAC
GTCGTAAAAT
 A G T C C G A T G A T C G T C A G C A T T G C A T G C A G T C A C G T A T G A C
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTCATAAAAC
CCAATAAAAA
 A G T C C G A T G A T C G T C A G C A T T G C A T G C A G T C A C G T A T G A C
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CTCATAAAAC-
NGYCATAAAWCH
 A C G T A G T C C G A T G A T C G T C A G C A T T G C A T G C A G T C A C G T A T G A C A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTCATAAAAC
CCAATAAAAC
 A G T C C G A T G A T C G T C A G C A T T G C A T G C A G T C A C G T A T G A C
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C