Information for 11-CACAGTGCACTTT (Motif 13)

A G T C G T C A A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A G C T A G C T A C G T
Reverse Opposite:
C G T A C T G A C T G A C T A G A C G T C T A G G T A C C G T A A G T C A C G T C T A G A C G T A C T G
p-value:1e-9
log p-value:-2.158e+01
Information Content per bp:1.819
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif16.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets59.1 +/- 23.3bp
Average Position of motif in Background59.5 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CACAGTGCACTTT----
-NNATTGGACTTTNGNN
 A G T C G T C A A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACAGTGCACTTT--
CGAACAGTGCTCACTAT
 A C G T A C G T A G T C G T C A A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A G C T A G C T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CACAGTGCACTTT----
--CCTTGCAATTTTTNN
 A G T C G T C A A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------CACAGTGCACTTT
CANAGNNCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A G C T A G C T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CACAGTGCACTTT
AGAGTCCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A G C T A G C T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACAGTGCACTTT-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A G T C G T C A A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A G C T A G C T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACAGTGCACTTT
CAAAGGTCAG---
 A G T C G T C A A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A G C T A G C T A C G T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CACAGTGCACTTT
TACCCACAATGCATTG-
 A C G T A C G T A C G T A C G T A G T C G T C A A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A G C T A G C T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CACAGTGCACTTT
GGGGTCAAAGTCCAAT--
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A G C T A G C T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CACAGTGCACTTT
CACAGN-------
 A G T C G T C A A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A G C T A G C T A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T