Information for 10-TGGCGTGTTCTGT (Motif 12)

A G C T A C T G A C T G A T G C C T A G A C G T A C T G A C G T A C G T A G T C A C G T C T A G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A G T C A T C G A G T C G T A C C T G A
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.2 +/- 16.9bp
Average Position of motif in Background32.3 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGGCGTGTTCTGT-
----CTGTTCCTGG
 A G C T A C T G A C T G A T G C C T A G A C G T A C T G A C G T A C G T A G T C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGGCGTGTTCTGT-----
---AGNGTTCTAATGANN
 A G C T A C T G A C T G A T G C C T A G A C G T A C T G A C G T A C G T A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGGCGTGTTCTGT
-TGCGTG------
 A G C T A C T G A C T G A T G C C T A G A C G T A C T G A C G T A C G T A G T C A C G T C T A G A C G T
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGCGTGTTCTGT---
-GTNTTGTTGTGANNT
 A G C T A C T G A C T G A T G C C T A G A C G T A C T G A C G T A C G T A G T C A C G T C T A G A C G T A C G T A C G T A C G T
A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGCGTGTTCTGT----
NNCTTTGTTTTGNTNNN
 A G C T A C T G A C T G A T G C C T A G A C G T A C T G A C G T A C G T A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGGCGTGTTCTGT-----
-CTAAGGTTCTAGATCAC
 A G C T A C T G A C T G A T G C C T A G A C G T A C T G A C G T A C G T A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGGCGTGTTCTGT
CGTGGGTGGTCC--
 A C G T A G C T A C T G A C T G A T G C C T A G A C G T A C T G A C G T A C G T A G T C A C G T C T A G A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGCGTGTTCTGT
ATGGGGTGAT----
 A C G T A G C T A C T G A C T G A T G C C T A G A C G T A C T G A C G T A C G T A G T C A C G T C T A G A C G T
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGCGTGTTCTGT
GTGGCGTGACNG--
 A C G T A G C T A C T G A C T G A T G C C T A G A C G T A C T G A C G T A C G T A G T C A C G T C T A G A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TGGCGTGTTCTGT
GRACAGWMTGTYCTB-
 A C G T A C G T A C G T A G C T A C T G A C T G A T G C C T A G A C G T A C T G A C G T A C G T A G T C A C G T C T A G A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T