Information for 5-GGTAGGCAGTKTGAGG (Motif 11)

A C T G A C T G A G C T C T G A A C T G A C T G A T G C G T C A T A C G A C G T A C T G A C G T A C T G C G T A C T A G A T C G
Reverse Opposite:
A T G C A G T C C G A T G T A C C G T A G T A C C G T A A G T C A C G T A T C G A G T C G T A C G A C T C T G A A G T C A G T C
p-value:1e-11
log p-value:-2.537e+01
Information Content per bp:1.768
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.9 +/- 27.2bp
Average Position of motif in Background52.9 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGTAGGCAGTKTGAGG
NGTAGGTTGGCATNNN----
 A C G T A C G T A C G T A C G T A C T G A C T G A G C T C T G A A C T G A C T G A T G C G T C A T A C G A C G T A C T G A C G T A C T G C G T A C T A G A T C G
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGTAGGCAGTKTGAGG
GGTTGGCAT-------
 A C T G A C T G A G C T C T G A A C T G A C T G A T G C G T C A T A C G A C G T A C T G A C G T A C T G C G T A C T A G A T C G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGTAGGCAGTKTGAGG
NGTGGGCAT-------
 A C T G A C T G A G C T C T G A A C T G A C T G A T G C G T C A T A C G A C G T A C T G A C G T A C T G C G T A C T A G A T C G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGTAGGCAGTKTGAGG
NNNTGGCAGTTGGTNN
 A C T G A C T G A G C T C T G A A C T G A C T G A T G C G T C A T A C G A C G T A C T G A C G T A C T G C G T A C T A G A T C G
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

PB0167.1_Sox13_2/Jaspar

Match Rank:5
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------GGTAGGCAGTKTGAGG
GTATTGGGTGGGTAATT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T C T G A A C T G A C T G A T G C G T C A T A C G A C G T A C T G A C G T A C T G C G T A C T A G A T C G
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T A C G T A C G T A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:GGTAGGCAGTKTGAGG
---TGGCAGTTGN---
 A C T G A C T G A G C T C T G A A C T G A C T G A T G C G T C A T A C G A C G T A C T G A C G T A C T G C G T A C T A G A T C G
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.48
Offset:3
Orientation:forward strand
Alignment:GGTAGGCAGTKTGAGG
---TGGCAGTTGG---
 A C T G A C T G A G C T C T G A A C T G A C T G A T G C G T C A T A C G A C G T A C T G A C G T A C T G C G T A C T A G A T C G
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--GGTAGGCAGTKTGAGG
CAGGTAAGTAT-------
 A C G T A C G T A C T G A C T G A G C T C T G A A C T G A C T G A T G C G T C A T A C G A C G T A C T G A C G T A C T G C G T A C T A G A T C G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:GGTAGGCAGTKTGAGG
-CACGGCAGTTGGTNN
 A C T G A C T G A G C T C T G A A C T G A C T G A T G C G T C A T A C G A C G T A C T G A C G T A C T G C G T A C T A G A T C G
A C G T T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-GGTAGGCAGTKTGAGG
AAGTCAGCANTTTTN--
 A C G T A C T G A C T G A G C T C T G A A C T G A C T G A T G C G T C A T A C G A C G T A C T G A C G T A C T G C G T A C T A G A T C G
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T A C G T