Information for 12-TGGCCCTCTGCCT (Motif 9)

A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C A C G T A C T G A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G G T A C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.457e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.8 +/- 28.2bp
Average Position of motif in Background75.5 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TGGCCCTCTGCCT-
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C A C G T A C T G A G T C A G T C C G A T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGGCCCTCTGCCT
CTGGCAGNCTGCCA
 A C G T A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C A C G T A C T G A G T C A G T C C G A T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCCTCTGCCT
TTGGCATGGTGCCA
 A C G T A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C A C G T A C T G A G T C A G T C C G A T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGGCCCTCTGCCT
--GCCATCTGTT-
 A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C A C G T A C T G A G T C A G T C C G A T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCCTCTGCCT--
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGGCCCTCTGCCT
GARTGGTCATCGCCC-
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C A C G T A C T G A G T C A G T C C G A T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGCCCTCTGCCT--
-TGACCTTTGCCCTA
 A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGGCCCTCTGCCT--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGCCCTCTGCCT---
-TGACCTTTGCCCTAN
 A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGGCCCTCTGCCT--
-TGACCTTTGCCCCA
 A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C A C G T A C T G A G T C A G T C C G A T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A