Information for 4-TGTSCAGGGAGGCTCC (Motif 6)

C A G T A T C G A G C T A T G C A G T C C G T A A C T G T C A G A T C G G T C A A T C G A C T G A T G C A G C T A G T C G T A C
Reverse Opposite:
A C T G A C T G C T G A A T C G G T A C A T G C A C G T A T G C A G T C A G T C G C A T A C T G T A C G T C G A A T G C G T C A
p-value:1e-11
log p-value:-2.618e+01
Information Content per bp:1.743
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.7 +/- 26.2bp
Average Position of motif in Background51.3 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTSCAGGGAGGCTCC--
-NTNNNAGGAGTCTCNTN
 C A G T A T C G A G C T A T G C A G T C C G T A A C T G T C A G A T C G G T C A A T C G A C T G A T G C A G C T A G T C G T A C A C G T A C G T
A C G T A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGTSCAGGGAGGCTCC
----MKGGGYGTGGCC
 C A G T A T C G A G C T A T G C A G T C C G T A A C T G T C A G A T C G G T C A A T C G A C T G A T G C A G C T A G T C G T A C
A C G T A C G T A C G T A C G T G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TGTSCAGGGAGGCTCC
------GGGAATTTCC
 C A G T A T C G A G C T A T G C A G T C C G T A A C T G T C A G A T C G G T C A A T C G A C T G A T G C A G C T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGTSCAGGGAGGCTCC
NNNACCGAGAGTNNN-
 C A G T A T C G A G C T A T G C A G T C C G T A A C T G T C A G A T C G G T C A A T C G A C T G A T G C A G C T A G T C G T A C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGTSCAGGGAGGCTCC
---CTTGAGTGGCT--
 C A G T A T C G A G C T A T G C A G T C C G T A A C T G T C A G A T C G G T C A A T C G A C T G A T G C A G C T A G T C G T A C
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TGTSCAGGGAGGCTCC
----GGGGGAATCCCC
 C A G T A T C G A G C T A T G C A G T C C G T A A C T G T C A G A T C G G T C A A T C G A C T G A T G C A G C T A G T C G T A C
A C G T A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:TGTSCAGGGAGGCTCC
------GGGAATTTCC
 C A G T A T C G A G C T A T G C A G T C C G T A A C T G T C A G A T C G G T C A A T C G A C T G A T G C A G C T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TGTSCAGGGAGGCTCC-
----AGGGGATTCCCCT
 C A G T A T C G A G C T A T G C A G T C C G T A A C T G T C A G A T C G G T C A A T C G A C T G A T G C A G C T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:TGTSCAGGGAGGCTCC
-----DGGGYGKGGC-
 C A G T A T C G A G C T A T G C A G T C C G T A A C T G T C A G A T C G G T C A A T C G A C T G A T G C A G C T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.49
Offset:11
Orientation:forward strand
Alignment:TGTSCAGGGAGGCTCC-
-----------GCTCCG
 C A G T A T C G A G C T A T G C A G T C C G T A A C T G T C A G A T C G G T C A A T C G A C T G A T G C A G C T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G