Information for 4-AGGCGGGACTTCC (Motif 3)

C T G A A T C G A C T G A T G C C T A G A C T G T C A G C T G A A T G C C A G T A C G T A G T C A G T C
Reverse Opposite:
A C T G C T A G C G T A G C T A A T C G A G C T A G T C G T A C A G T C T A C G A G T C A T G C A G C T
p-value:1e-15
log p-value:-3.458e+01
Information Content per bp:1.779
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif35.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets40.4 +/- 22.8bp
Average Position of motif in Background46.0 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------AGGCGGGACTTCC
GGGNGGGGGCGGGGC----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T C G A C T G A T G C C T A G A C T G T C A G C T G A A T G C C A G T A C G T A G T C A G T C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGGCGGGACTTCC
CWGGCGGGAA----
 A C G T C T G A A T C G A C T G A T G C C T A G A C T G T C A G C T G A A T G C C A G T A C G T A G T C A G T C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGCGGGACTTCC
BTKGGCGGGAAA---
 A C G T A C G T C T G A A T C G A C T G A T G C C T A G A C T G T C A G C T G A A T G C C A G T A C G T A G T C A G T C
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGGCGGGACTTCC
---GGGGATTTCC
 C T G A A T C G A C T G A T G C C T A G A C T G T C A G C T G A A T G C C A G T A C G T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGGCGGGACTTCC
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T C T G A A T C G A C T G A T G C C T A G A C T G T C A G C T G A A T G C C A G T A C G T A G T C A G T C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGCGGGACTTCC
GGGCGGGACC---
 C T G A A T C G A C T G A T G C C T A G A C T G T C A G C T G A A T G C C A G T A C G T A G T C A G T C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGCGGGACTTCC
GGGCGGGAAGG--
 C T G A A T C G A C T G A T G C C T A G A C T G T C A G C T G A A T G C C A G T A C G T A G T C A G T C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGGCGGGACTTCC
-GGCGGGAARN--
 C T G A A T C G A C T G A T G C C T A G A C T G T C A G C T G A A T G C C A G T A C G T A G T C A G T C
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGGCGGGACTTCC
-GGCGGGAAAH--
 C T G A A T C G A C T G A T G C C T A G A C T G T C A G C T G A A T G C C A G T A C G T A G T C A G T C
A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AGGCGGGACTTCC
NAGANTGGCGGGGNGNA-
 A C G T A C G T A C G T A C G T A C G T C T G A A T C G A C T G A T G C C T A G A C T G T C A G C T G A A T G C C A G T A C G T A G T C A G T C
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T