Information for 6-CTCCCAGGCCAGA (Motif 7)

A G T C A C G T A G T C G A T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C T G C A T G A C T G C G T A T A C G
p-value:1e-11
log p-value:-2.611e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.0 +/- 13.4bp
Average Position of motif in Background53.8 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTCCCAGGCCAGA---
-TCCCAGMCRAGCCCC
 A G T C A C G T A G T C G A T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G C T G A A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTCCCAGGCCAGA
--CAAAGGTCAG-
 A G T C A C G T A G T C G A T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G C T G A
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTCCCAGGCCAGA--
-----ATGCCAGACN
 A G T C A C G T A G T C G A T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTCCCAGGCCAGA
---CTAGGCCT--
 A G T C A C G T A G T C G A T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G C T G A
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTCCCAGGCCAGA
---CNAGGCCT--
 A G T C A C G T A G T C G A T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G C T G A
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCCCAGGCCAGA
HTTTCCCASG-----
 A C G T A C G T A G T C A C G T A G T C G A T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G C T G A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCCCAGGCCAGA
-NTCAAGGTCA--
 A G T C A C G T A G T C G A T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G C T G A
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTCCCAGGCCAGA-----
----CAGGCCNNGGCCNN
 A G T C A C G T A G T C G A T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTCCCAGGCCAGA--
----AAGGCAAGTGT
 A G T C A C G T A G T C G A T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCCCAGGCCAGA
GCCTCAGGGCAT-
 A G T C A C G T A G T C G A T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G C T G A
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T