Information for 16-CCTCYGTCCCCAC (Motif 17)

A G T C G T A C A G C T A G T C A G C T A T C G A C G T G T A C A G T C G A T C A T G C C T G A A G T C
Reverse Opposite:
C T A G G A C T T A C G C A T G C T A G C A T G T G C A T A G C T C G A C T A G C T G A A C T G C T A G
p-value:1e-6
log p-value:-1.499e+01
Information Content per bp:1.669
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif2.98%
Number of Background Sequences with motif468.2
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets50.4 +/- 29.0bp
Average Position of motif in Background49.1 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTCYGTCCCCAC
TGACCTCTGACCCCN-
 A C G T A C G T A C G T A G T C G T A C A G C T A G T C A G C T A T C G A C G T G T A C A G T C G A T C A T G C C T G A A G T C
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTCYGTCCCCAC-
CCCCCGCCCCCGCC
 A G T C G T A C A G C T A G T C A G C T A T C G A C G T G T A C A G T C G A T C A T G C C T G A A G T C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCTCYGTCCCCAC
TGACCTTTGCCCCA--
 A C G T A C G T A C G T A G T C G T A C A G C T A G T C A G C T A T C G A C G T G T A C A G T C G A T C A T G C C T G A A G T C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTCYGTCCCCAC
TGACCTTTGACCTC--
 A C G T A C G T A C G T A G T C G T A C A G C T A G T C A G C T A T C G A C G T G T A C A G T C G A T C A T G C C T G A A G T C
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTCYGTCCCCAC
TGACCTTTGCCCTA--
 A C G T A C G T A C G T A G T C G T A C A G C T A G T C A G C T A T C G A C G T G T A C A G T C G A T C A T G C C T G A A G T C
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTCYGTCCCCAC
CCCCCTTGGGCCCC--
 A C G T A C G T A C G T A G T C G T A C A G C T A G T C A G C T A T C G A C G T G T A C A G T C G A T C A T G C C T G A A G T C
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTCYGTCCCCAC
YCTTTGTTCC---
 A G T C G T A C A G C T A G T C A G C T A T C G A C G T G T A C A G T C G A T C A T G C C T G A A G T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTCYGTCCCCAC
TGACCTTTGCCCTAN-
 A C G T A C G T A C G T A G T C G T A C A G C T A G T C A G C T A T C G A C G T G T A C A G T C G A T C A T G C C T G A A G T C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTCYGTCCCCAC
TGACCTTTGACCCC--
 A C G T A C G T A C G T A G T C G T A C A G C T A G T C A G C T A T C G A C G T G T A C A G T C G A T C A T G C C T G A A G T C
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTCYGTCCCCAC
TGCCTGCGYCMCCTT
 A C G T A C G T A G T C G T A C A G C T A G T C A G C T A T C G A C G T G T A C A G T C G A T C A T G C C T G A A G T C
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T