Information for 7-GCCAGGCTGCATCCCA (Motif 14)

A C T G A G T C A G T C C G T A A C T G A T C G A G T C A C G T A C T G A G T C C G T A C A G T A T G C A G T C A G T C G T C A
Reverse Opposite:
A C G T A C T G A C T G A T C G G C T A A C G T A C T G T A G C C G T A A C T G A T G C A G T C A C G T A C T G A C T G A G T C
p-value:1e-8
log p-value:-1.896e+01
Information Content per bp:1.878
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.2 +/- 28.4bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCCAGGCTGCATCCCA
--CTGGCAGNCTGCCA
 A C T G A G T C A G T C C G T A A C T G A T C G A G T C A C G T A C T G A G T C C G T A C A G T A T G C A G T C A G T C G T C A
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCAGGCTGCATCCCA-
-CTTGGCANNNTGCCAA
 A C T G A G T C A G T C C G T A A C T G A T C G A G T C A C G T A C T G A G T C C G T A C A G T A T G C A G T C A G T C G T C A A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCCAGGCTGCATCCCA-----
----NNNTCCATCCCATAANN
 A C T G A G T C A G T C C G T A A C T G A T C G A G T C A C G T A C T G A G T C C G T A C A G T A T G C A G T C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GCCAGGCTGCATCCCA
CGTGCCAAG----------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A T C G A G T C A C G T A C T G A G T C C G T A C A G T A T G C A G T C A G T C G T C A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGCTGCATCCCA
TGCCAA-----------
 A C G T A C T G A G T C A G T C C G T A A C T G A T C G A G T C A C G T A C T G A G T C C G T A C A G T A T G C A G T C A G T C G T C A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCCAGGCTGCATCCCA-
---TGGCACCATGCCAA
 A C T G A G T C A G T C C G T A A C T G A T C G A G T C A C G T A C T G A G T C C G T A C A G T A T G C A G T C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCCAGGCTGCATCCCA
GTGCCACGCGACTG----
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G A T C G A G T C A C G T A C T G A G T C C G T A C A G T A T G C A G T C A G T C G T C A
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GCCAGGCTGCATCCCA
ACTATGCCAACCTACC-----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A T C G A G T C A C G T A C T G A G T C C G T A C A G T A T G C A G T C A G T C G T C A
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGGCTGCATCCCA
ATGCCAGACN--------
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G A T C G A G T C A C G T A C T G A G T C C G T A C A G T A T G C A G T C A G T C G T C A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GCCAGGCTGCATCCCA
----GGCTCYAKCAYC
 A C T G A G T C A G T C C G T A A C T G A T C G A G T C A C G T A C T G A G T C C G T A C A G T A T G C A G T C A G T C G T C A
A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C