Information for 11-GAAGAGGGCACTG (Motif 10)

A T C G T C G A C T G A A C T G G T C A C T A G A T C G A T C G T A G C T C G A A T G C G A C T A C T G
Reverse Opposite:
G T A C C T G A A T C G A G C T A C T G A T G C A T G C A G T C C A G T A G T C A G C T A C G T A T G C
p-value:1e-9
log p-value:-2.198e+01
Information Content per bp:1.777
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif48.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets46.1 +/- 27.0bp
Average Position of motif in Background49.8 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GAAGAGGGCACTG---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T C G T C G A C T G A A C T G G T C A C T A G A T C G A T C G T A G C T C G A A T G C G A C T A C T G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GAAGAGGGCACTG-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G T C G A C T G A A C T G G T C A C T A G A T C G A T C G T A G C T C G A A T G C G A C T A C T G A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GAAGAGGGCACTG
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G T C G A C T G A A C T G G T C A C T A G A T C G A T C G T A G C T C G A A T G C G A C T A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAAGAGGGCACTG
NGAAGC--------
 A C G T A T C G T C G A C T G A A C T G G T C A C T A G A T C G A T C G T A G C T C G A A T G C G A C T A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAAGAGGGCACTG---
-AAGGKGRCGCAGGCA
 A T C G T C G A C T G A A C T G G T C A C T A G A T C G A T C G T A G C T C G A A T G C G A C T A C T G A C G T A C G T A C G T
A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAAGAGGGCACTG
--NGTGGGCAT--
 A T C G T C G A C T G A A C T G G T C A C T A G A T C G A T C G T A G C T C G A A T G C G A C T A C T G
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GAAGAGGGCACTG
TAGGGCAAAGGTCA---
 A C G T A C G T A C G T A C G T A T C G T C G A C T G A A C T G G T C A C T A G A T C G A T C G T A G C T C G A A T G C G A C T A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAAGAGGGCACTG
CAAGATGGCGGC-
 A T C G T C G A C T G A A C T G G T C A C T A G A T C G A T C G T A G C T C G A A T G C G A C T A C T G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAAGAGGGCACTG
--AGRGGTCA---
 A T C G T C G A C T G A A C T G G T C A C T A G A T C G A T C G T A G C T C G A A T G C G A C T A C T G
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAAGAGGGCACTG
CAAGATGGCGGC-
 A T C G T C G A C T G A A C T G G T C A C T A G A T C G A T C G T A G C T C G A A T G C G A C T A C T G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T