Information for 15-GCTGAGSGTCACA (Motif 23)

A T C G A T G C A C G T A C T G G T C A A C T G A T C G T A C G A C G T A G T C G T C A A G T C T C G A
Reverse Opposite:
A C G T A C T G A C G T A C T G C G T A A G T C A T G C A G T C A C G T A G T C C G T A A T C G A T G C
p-value:1e-7
log p-value:-1.752e+01
Information Content per bp:1.836
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif25.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.0 +/- 25.9bp
Average Position of motif in Background60.5 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTGAGSGTCACA--
CGCGCCGGGTCACGTA
 A C G T A T C G A T G C A C G T A C T G G T C A A C T G A T C G T A C G A C G T A G T C G T C A A G T C T C G A A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTGAGSGTCACA
GCTCGGSCTC---
 A T C G A T G C A C G T A C T G G T C A A C T G A T C G T A C G A C G T A G T C G T C A A G T C T C G A
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTGAGSGTCACA
--TGGGGCCCAC-
 A T C G A T G C A C G T A C T G G T C A A C T G A T C G T A C G A C G T A G T C G T C A A G T C T C G A
A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTGAGSGTCACA
GCTGTG-------
 A T C G A T G C A C G T A C T G G T C A A C T G A T C G T A C G A C G T A G T C G T C A A G T C T C G A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCTGAGSGTCACA
GSCTGTCACTCA--
 A C G T A T C G A T G C A C G T A C T G G T C A A C T G A T C G T A C G A C G T A G T C G T C A A G T C T C G A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTGAGSGTCACA
NCTGTCAATCAN-
 A T C G A T G C A C G T A C T G G T C A A C T G A T C G T A C G A C G T A G T C G T C A A G T C T C G A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCTGAGSGTCACA
SCTGTCAVTCAV-
 A T C G A T G C A C G T A C T G G T C A A C T G A T C G T A C G A C G T A G T C G T C A A G T C T C G A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCTGAGSGTCACA
CCTGCTGAGH------
 A C G T A C G T A C G T A T C G A T G C A C G T A C T G G T C A A C T G A T C G T A C G A C G T A G T C G T C A A G T C T C G A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GCTGAGSGTCACA
AATTTGCTGAC-------
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T A C T G G T C A A C T G A T C G T A C G A C G T A G T C G T C A A G T C T C G A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GCTGAGSGTCACA----
-------GTCACATGAY
 A T C G A T G C A C G T A C T G G T C A A C T G A T C G T A C G A C G T A G T C G T C A A G T C T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C