Information for 12-TCCTTACCAAGCT (Motif 20)

A G C T A G T C A G T C A G C T A C G T C G T A G T A C A G T C C G T A C T G A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G C T A C G T A C T G A C T G A C G T C G T A C T G A A C T G A C T G C T G A
p-value:1e-8
log p-value:-1.932e+01
Information Content per bp:1.939
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 18.2bp
Average Position of motif in Background24.9 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:forward strand
Alignment:TCCTTACCAAGCT-
-------CAAGCTT
 A G C T A G T C A G T C A G C T A C G T C G T A G T A C A G T C C G T A C T G A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTACCAAGCT-
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A G C T A G T C A G T C A G C T A C G T C G T A G T A C A G T C C G T A C T G A A C T G A G T C A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCCTTACCAAGCT
NNACTTACCTN---
 A C G T A G C T A G T C A G T C A G C T A C G T C G T A G T A C A G T C C G T A C T G A A C T G A G T C A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TCCTTACCAAGCT-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G C T A C G T C G T A G T A C A G T C C G T A C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCCTTACCAAGCT--
TCCCAGMCRAGCCCC
 A G C T A G T C A G T C A G C T A C G T C G T A G T A C A G T C C G T A C T G A A C T G A G T C A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCCTTACCAAGCT-
TACCATAGCAACGGT
 A C G T A G C T A G T C A G T C A G C T A C G T C G T A G T A C A G T C C G T A C T G A A C T G A G T C A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0023.1_Gata6_1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTACCAAGCT-
NNANTCTTATCTNNNNN
 A C G T A C G T A C G T A G C T A G T C A G T C A G C T A C G T C G T A G T A C A G T C C G T A C T G A A C T G A G T C A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TCCTTACCAAGCT
-YCTTATCWVN--
 A G C T A G T C A G T C A G C T A C G T C G T A G T A C A G T C C G T A C T G A A C T G A G T C A C G T
A C G T A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TCCTTACCAAGCT
---TTGCCAAG--
 A G C T A G T C A G T C A G C T A C G T C G T A G T A C A G T C C G T A C T G A A C T G A G T C A C G T
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCCTTACCAAGCT
-YCTTATCTBN--
 A G C T A G T C A G T C A G C T A C G T C G T A G T A C A G T C C G T A C T G A A C T G A G T C A C G T
A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T A C G T