Information for 5-AGRATACACTTTYTCY (Motif 6)

C G T A C T A G C T A G C G T A A G C T C G T A G T A C C G T A A G T C A G C T A C G T A G C T A G C T A C G T A G T C A G C T
Reverse Opposite:
T C G A A C T G C G T A T C G A C T G A C G T A C T G A T C A G C G A T A C T G C G A T T C G A A C G T A G T C A G T C C G A T
p-value:1e-12
log p-value:-2.768e+01
Information Content per bp:1.752
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.6 +/- 28.3bp
Average Position of motif in Background49.1 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGRATACACTTTYTCY----
NTGACTCANTTTTTCCANTN
 C G T A C T A G C T A G C G T A A G C T C G T A G T A C C G T A A G T C A G C T A C G T A G C T A G C T A C G T A G T C A G C T A C G T A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AGRATACACTTTYTCY
------CACTTCCTCT
 C G T A C T A G C T A G C G T A A G C T C G T A G T A C C G T A A G T C A G C T A C G T A G C T A G C T A C G T A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AGRATACACTTTYTCY---
-------ACTTTCACTTTC
 C G T A C T A G C T A G C G T A A G C T C G T A G T A C C G T A A G T C A G C T A C G T A G C T A G C T A C G T A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGRATACACTTTYTCY----
------TTTTTTTTCNNGTN
 C G T A C T A G C T A G C G T A A G C T C G T A G T A C C G T A A G T C A G C T A C G T A G C T A G C T A C G T A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGRATACACTTTYTCY
TWGHWACAWTGTWDC-
 C G T A C T A G C T A G C G T A A G C T C G T A G T A C C G T A A G T C A G C T A C G T A G C T A G C T A C G T A G T C A G C T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGRATACACTTTYTCY
YDGHTACAWTGTADC-
 C G T A C T A G C T A G C G T A A G C T C G T A G T A C C G T A A G T C A G C T A C G T A G C T A G C T A C G T A G T C A G C T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AGRATACACTTTYTCY----
-----TCACTTTCACTTTCN
 C G T A C T A G C T A G C G T A A G C T C G T A G T A C C G T A A G T C A G C T A C G T A G C T A G C T A C G T A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.52
Offset:10
Orientation:forward strand
Alignment:AGRATACACTTTYTCY-
----------TTTTCCA
 C G T A C T A G C T A G C G T A A G C T C G T A G T A C C G T A A G T C A G C T A C G T A G C T A G C T A C G T A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGRATACACTTTYTCY
NTTGATACATT------
 A C G T C G T A C T A G C T A G C G T A A G C T C G T A G T A C C G T A A G T C A G C T A C G T A G C T A G C T A C G T A G T C A G C T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGRATACACTTTYTCY
-CCTTGCAATTTTTNN
 C G T A C T A G C T A G C G T A A G C T C G T A G T A C C G T A A G T C A G C T A C G T A G C T A G C T A C G T A G T C A G C T
A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C