Information for 2-CMTCTMTGTGCAT (Motif 4)

G T A C G T A C A C G T A G T C A C G T T G A C G C A T A T C G C G A T C T A G A G T C C G T A A C G T
Reverse Opposite:
G T C A C G A T T C A G G A T C G C T A T A G C C G T A A C T G C G T A T C A G T C G A A C T G A C T G
p-value:1e-13
log p-value:-3.083e+01
Information Content per bp:1.627
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif5.16%
Number of Background Sequences with motif482.3
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets51.4 +/- 25.9bp
Average Position of motif in Background51.0 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CMTCTMTGTGCAT-----
-NTNTATGTGCACATNNN
 G T A C G T A C A C G T A G T C A C G T T G A C G C A T A T C G C G A T C T A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CMTCTMTGTGCAT------
--NSTGTTTRCWCAGBNNN
 G T A C G T A C A C G T A G T C A C G T T G A C G C A T A T C G C G A T C T A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CMTCTMTGTGCAT---
NNNTTTGTTTACTTTTN
 A C G T G T A C G T A C A C G T A G T C A C G T T G A C G C A T A T C G C G A T C T A G A G T C C G T A A C G T A C G T A C G T A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CMTCTMTGTGCAT-
----TRTTTACTTW
 G T A C G T A C A C G T A G T C A C G T T G A C G C A T A T C G C G A T C T A G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CMTCTMTGTGCAT--
NNNNTTGTGTGCTTNN
 A C G T G T A C G T A C A C G T A G T C A C G T T G A C G C A T A T C G C G A T C T A G A G T C C G T A A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CMTCTMTGTGCAT
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T G T A C G T A C A C G T A G T C A C G T T G A C G C A T A T C G C G A T C T A G A G T C C G T A A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

SRF/MA0083.3/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CMTCTMTGTGCAT
TGNCCATATATGGTCA-
 A C G T A C G T A C G T A C G T G T A C G T A C A C G T A G T C A C G T T G A C G C A T A T C G C G A T C T A G A G T C C G T A A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CMTCTMTGTGCAT---
-CTTTGTTTACTTTTN
 G T A C G T A C A C G T A G T C A C G T T G A C G C A T A T C G C G A T C T A G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CMTCTMTGTGCAT-
----TGTTTACTTT
 G T A C G T A C A C G T A G T C A C G T T G A C G C A T A T C G C G A T C T A G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CMTCTMTGTGCAT----
NATTTAAGTACTTANNA
 G T A C G T A C A C G T A G T C A C G T T G A C G C A T A T C G C G A T C T A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A