Information for 15-GGAAHAAGAATAA (Motif 27)

A C T G A C T G C G T A C G T A G T A C C G T A C T G A A C T G C G T A C G T A A C G T C G T A C G T A
Reverse Opposite:
C G A T A C G T C G T A C G A T A C G T A G T C A G C T C G A T C A T G A C G T C G A T G T A C A G T C
p-value:1e-6
log p-value:-1.564e+01
Information Content per bp:1.816
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif29.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.4 +/- 26.0bp
Average Position of motif in Background43.8 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGAAHAAGAATAA
GTAATCDGATTA-
 A C T G A C T G C G T A C G T A G T A C C G T A C T G A A C T G C G T A C G T A A C G T C G T A C G T A
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGAAHAAGAATAA--
-----ATGAATATTC
 A C T G A C T G C G T A C G T A G T A C C G T A C T G A A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

POU3F3/MA0788.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGAAHAAGAATAA-
-AAATTAGCATAAT
 A C T G A C T G C G T A C G T A G T A C C G T A C T G A A C T G C G T A C G T A A C G T C G T A C G T A A C G T
A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGAAHAAGAATAA
-----NGGATTAA
 A C T G A C T G C G T A C G T A G T A C C G T A C T G A A C T G C G T A C G T A A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PH0126.1_Obox6/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGAAHAAGAATAA--
AAAAACGGATTATTG
 A C T G A C T G C G T A C G T A G T A C C G T A C T G A A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGAAHAAGAATAA
--AAGAGGATTAG
 A C T G A C T G C G T A C G T A G T A C C G T A C T G A A C T G C G T A C G T A A C G T C G T A C G T A
A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGAAHAAGAATAA--
-----ATGMATATDC
 A C T G A C T G C G T A C G T A G T A C C G T A C T G A A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PB0064.1_Sox14_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGAAHAAGAATAA--
GCTAATTATAATTATC
 A C G T A C T G A C T G C G T A C G T A G T A C C G T A C T G A A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

Dmbx1/MA0883.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAAHAAGAATAA----
TGAACCGGATTAATGAA
 A C T G A C T G C G T A C G T A G T A C C G T A C T G A A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAAHAAGAATAA----
TGAACCGGATTAATGAA
 A C T G A C T G C G T A C G T A G T A C C G T A C T G A A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A