Information for 9-GTTTGCACKCATT (Motif 18)

C A T G A C G T A C G T A C G T C T A G A G T C C G T A G T A C C A G T A T G C G T C A C A G T C G A T
Reverse Opposite:
C G T A G T C A A C G T A T C G G T C A A C T G A C G T A C T G G A T C G T C A T G C A C G T A G T A C
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.724
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif85.7
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets59.4 +/- 26.5bp
Average Position of motif in Background47.4 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTTTGCACKCATT-
TACATGTGCACATAAAA
 A C G T A C G T A C G T C A T G A C G T A C G T A C G T C T A G A G T C C G T A G T A C C A G T A T G C G T C A C A G T C G A T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTTTGCACKCATT--
ATTTGCATACAATGG
 C A T G A C G T A C G T A C G T C T A G A G T C C G T A G T A C C A G T A T G C G T C A C A G T C G A T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTTTGCACKCATT
--TBGCACGCAA-
 C A T G A C G T A C G T A C G T C T A G A G T C C G T A G T A C C A G T A T G C G T C A C A G T C G A T
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GTTTGCACKCATT
-----CACGCA--
 C A T G A C G T A C G T A C G T C T A G A G T C C G T A G T A C C A G T A T G C G T C A C A G T C G A T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGCACKCATT
TGTTTACH------
 A C G T C A T G A C G T A C G T A C G T C T A G A G T C C G T A G T A C C A G T A T G C G T C A C A G T C G A T
A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGCACKCATT---
NNTTTTCACACCTTNNN
 A C G T C A T G A C G T A C G T A C G T C T A G A G T C C G T A G T A C C A G T A T G C G T C A C A G T C G A T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTTTGCACKCATT
NTTTTCACACCTT
 C A T G A C G T A C G T A C G T C T A G A G T C C G T A G T A C C A G T A T G C G T C A C A G T C G A T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

Foxo1/MA0480.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTTTGCACKCATT
TCCTGTTTACA------
 A C G T A C G T A C G T A C G T C A T G A C G T A C G T A C G T C T A G A G T C C G T A G T A C C A G T A T G C G T C A C A G T C G A T
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTTTGCACKCATT-
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T C A T G A C G T A C G T A C G T C T A G A G T C C G T A G T A C C A G T A T G C G T C A C A G T C G A T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTTTGCACKCATT
CNTGTTTACATA----
 A C G T A C G T A C G T C A T G A C G T A C G T A C G T C T A G A G T C C G T A G T A C C A G T A T G C G T C A C A G T C G A T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T A C G T