Information for 11-GAACCATTATCAA (Motif 24)

A T C G C G T A C G T A A G T C A G T C C G T A A G C T A C G T C G T A C G A T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A A C G T C G T A C T G A A C G T A C T G C T A G A C G T C G A T T A G C
p-value:1e-8
log p-value:-1.875e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.7 +/- 28.9bp
Average Position of motif in Background45.2 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GAACCATTATCAA
AAACMATTAN---
 A T C G C G T A C G T A A G T C A G T C C G T A A G C T A C G T C G T A C G A T A G T C C G T A C G T A
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GAACCATTATCAA
---YCATTAMC--
 A T C G C G T A C G T A A G T C A G T C C G T A A G C T A C G T C G T A C G A T A G T C C G T A C G T A
A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAACCATTATCAA
-ACCGATTAG---
 A T C G C G T A C G T A A G T C A G T C C G T A A G C T A C G T C G T A C G A T A G T C C G T A C G T A
A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAACCATTATCAA
--GCAATTAG---
 A T C G C G T A C G T A A G T C A G T C C G T A A G C T A C G T C G T A C G A T A G T C C G T A C G T A
A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAACCATTATCAA
AAAAACCATTAAGG-
 A C G T A C G T A T C G C G T A C G T A A G T C A G T C C G T A A G C T A C G T C G T A C G A T A G T C C G T A C G T A
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAACCATTATCAA
-GGCCATTAAC--
 A T C G C G T A C G T A A G T C A G T C C G T A A G C T A C G T C G T A C G A T A G T C C G T A C G T A
A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAACCATTATCAA----
NNANTCTTATCTNNNNN
 A T C G C G T A C G T A A G T C A G T C C G T A A G C T A C G T C G T A C G A T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

GATA5/MA0766.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAACCATTATCAA
----TCTTATCT-
 A T C G C G T A C G T A A G T C A G T C C G T A A G C T A C G T C G T A C G A T A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAACCATTATCAA
-ACTAATTAGC--
 A T C G C G T A C G T A A G T C A G T C C G T A A G C T A C G T C G T A C G A T A G T C C G T A C G T A
A C G T C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAACCATTATCAA----
NTNTTCTTATCAGTNTN
 A T C G C G T A C G T A A G T C A G T C C G T A A G C T A C G T C G T A C G A T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A