Information for 4-AATGTTTTTGTAT (Motif 11)

C G T A C G T A A C G T C T A G G A C T A C G T A C G T A C G T A C G T A T C G A C G T C T G A A C G T
Reverse Opposite:
C G T A A G C T C G T A A T G C C G T A C G T A C G T A C G T A C G T A A G T C C G T A A C G T A C G T
p-value:1e-10
log p-value:-2.417e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.5 +/- 21.8bp
Average Position of motif in Background41.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AATGTTTTTGTAT
GAATGTTTGTTT--
 A C G T C G T A C G T A A C G T C T A G G A C T A C G T A C G T A C G T A C G T A T C G A C G T C T G A A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AATGTTTTTGTAT
AACAATGNTATTGTT-
 A C G T A C G T A C G T C G T A C G T A A C G T C T A G G A C T A C G T A C G T A C G T A C G T A T C G A C G T C T G A A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AATGTTTTTGTAT-
NNNTGTTGTTGTTNG
 A C G T C G T A C G T A A C G T C T A G G A C T A C G T A C G T A C G T A C G T A T C G A C G T C T G A A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AATGTTTTTGTAT-
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T C G T A C G T A A C G T C T A G G A C T A C G T A C G T A C G T A C G T A T C G A C G T C T G A A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AATGTTTTTGTAT----
-ANTCCTTTGTCTNNNN
 C G T A C G T A A C G T C T A G G A C T A C G T A C G T A C G T A C G T A T C G A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AATGTTTTTGTAT---
NNNNTTTTTTTTTNAAC
 A C G T C G T A C G T A A C G T C T A G G A C T A C G T A C G T A C G T A C G T A T C G A C G T C T G A A C G T A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AATGTTTTTGTAT
--TGTTTATTT--
 C G T A C G T A A C G T C T A G G A C T A C G T A C G T A C G T A C G T A T C G A C G T C T G A A C G T
A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AATGTTTTTGTAT
TATTGTTTATT---
 A C G T C G T A C G T A A C G T C T A G G A C T A C G T A C G T A C G T A C G T A T C G A C G T C T G A A C G T
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AATGTTTTTGTAT-
AYATGYATATGCATR
 A C G T C G T A C G T A A C G T C T A G G A C T A C G T A C G T A C G T A C G T A T C G A C G T C T G A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AATGTTTTTGTAT
NNGTANTGTTTTNC---
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C T A G G A C T A C G T A C G T A C G T A C G T A T C G A C G T C T G A A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T A C G T A C G T