Information for 8-TGYCAWGAWAYTKYSA (Motif 8)

A C G T C A T G A G T C A G T C C G T A C G A T A C T G C G T A C G A T G T C A A G C T A C G T A C G T A G T C A T G C C G T A
Reverse Opposite:
A C G T A T C G C T A G G T C A C G T A C T G A A C G T C G T A A C G T A G T C G C A T A C G T A C T G C T A G G T A C C G T A
p-value:1e-12
log p-value:-2.899e+01
Information Content per bp:1.812
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 20.1bp
Average Position of motif in Background76.0 +/- 6.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGYCAWGAWAYTKYSA
TTGCCAAG---------
 A C G T A C G T C A T G A G T C A G T C C G T A C G A T A C T G C G T A C G A T G T C A A G C T A C G T A C G T A G T C A T G C C G T A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGYCAWGAWAYTKYSA
GGTGCCAAGT--------
 A C G T A C G T A C G T C A T G A G T C A G T C C G T A C G A T A C T G C G T A C G A T G T C A A G C T A C G T A C G T A G T C A T G C C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGYCAWGAWAYTKYSA
NTGTCAN----------
 A C G T A C G T C A T G A G T C A G T C C G T A C G A T A C T G C G T A C G A T G T C A A G C T A C G T A C G T A G T C A T G C C G T A
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGYCAWGAWAYTKYSA
CCTGTCAA----------
 A C G T A C G T A C G T C A T G A G T C A G T C C G T A C G A T A C T G C G T A C G A T G T C A A G C T A C G T A C G T A G T C A T G C C G T A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGYCAWGAWAYTKYSA
CGTGCCAAG---------
 A C G T A C G T A C G T C A T G A G T C A G T C C G T A C G A T A C T G C G T A C G A T G T C A A G C T A C G T A C G T A G T C A T G C C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGYCAWGAWAYTKYSA
-NACAGGAAAT-----
 A C G T C A T G A G T C A G T C C G T A C G A T A C T G C G T A C G A T G T C A A G C T A C G T A C G T A G T C A T G C C G T A
A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGYCAWGAWAYTKYSA
TTTCCAGGAAATGG---
 A C G T A C G T C A T G A G T C A G T C C G T A C G A T A C T G C G T A C G A T G T C A A G C T A C G T A C G T A G T C A T G C C G T A
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGYCAWGAWAYTKYSA
RHTGWCAR----------
 A C G T A C G T A C G T C A T G A G T C A G T C C G T A C G A T A C T G C G T A C G A T G T C A A G C T A C G T A C G T A G T C A T G C C G T A
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGYCAWGAWAYTKYSA
TGTCANYT--------
 A C G T C A T G A G T C A G T C C G T A C G A T A C T G C G T A C G A T G T C A A G C T A C G T A C G T A G T C A T G C C G T A
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGYCAWGAWAYTKYSA
GCTGTCAA----------
 A C G T A C G T A C G T C A T G A G T C A G T C C G T A C G A T A C T G C G T A C G A T G T C A A G C T A C G T A C G T A G T C A T G C C G T A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T