Information for 5-TGGTCYTAAACATCTA (Motif 4)

A C G T C T A G A C T G A G C T A G T C A G T C A C G T C G T A C G T A C G T A G A T C C G T A C G A T A G T C A C G T G T C A
Reverse Opposite:
C A G T C G T A T A C G C G T A A C G T C A T G G C A T G A C T C G A T G T C A C T A G A C T G C T G A A G T C G A T C C G T A
p-value:1e-14
log p-value:-3.314e+01
Information Content per bp:1.719
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 19.0bp
Average Position of motif in Background39.9 +/- 4.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TGGTCYTAAACATCTA
NNANTGGTGGTCTTNNN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A G C T A G T C A G T C A C G T C G T A C G T A C G T A G A T C C G T A C G A T A G T C A C G T G T C A
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGGTCYTAAACATCTA
TAAGGTCGTAAAATCCT-
 A C G T A C G T A C G T C T A G A C T G A G C T A G T C A G T C A C G T C G T A C G T A C G T A G A T C C G T A C G A T A G T C A C G T G T C A
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGTCYTAAACATCTA
-GGTCGTAAAATT---
 A C G T C T A G A C T G A G C T A G T C A G T C A C G T C G T A C G T A C G T A G A T C C G T A C G A T A G T C A C G T G T C A
A C G T C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TGGTCYTAAACATCTA
NNATTGGACTTTNGNN----
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A G C T A G T C A G T C A C G T C G T A C G T A C G T A G A T C C G T A C G A T A G T C A C G T G T C A
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGGTCYTAAACATCTA
-AGTCGTAAAAA----
 A C G T C T A G A C T G A G C T A G T C A G T C A C G T C G T A C G T A C G T A G A T C C G T A C G A T A G T C A C G T G T C A
A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T A C G T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGGTCYTAAACATCTA
-GGTCGTAAAAA----
 A C G T C T A G A C T G A G C T A G T C A G T C A C G T C G T A C G T A C G T A G A T C C G T A C G A T A G T C A C G T G T C A
A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGGTCYTAAACATCTA
CAAGGTCGTAAAATCTT-
 A C G T A C G T A C G T C T A G A C T G A G C T A G T C A G T C A C G T C G T A C G T A C G T A G A T C C G T A C G A T A G T C A C G T G T C A
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TGGTCYTAAACATCTA
TAAAGTCGTAAAACGT--
 A C G T A C G T A C G T C T A G A C T G A G C T A G T C A G T C A C G T C G T A C G T A C G T A G A T C C G T A C G A T A G T C A C G T G T C A
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TGGTCYTAAACATCTA
-GGTCGTAAAAT----
 A C G T C T A G A C T G A G C T A G T C A G T C A C G T C G T A C G T A C G T A G A T C C G T A C G A T A G T C A C G T G T C A
A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T A C G T A C G T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TGGTCYTAAACATCTA
TTAGGTCGTAAAATTTC-
 A C G T A C G T A C G T C T A G A C T G A G C T A G T C A G T C A C G T C G T A C G T A C G T A G A T C C G T A C G A T A G T C A C G T G T C A
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C A C G T