Information for 17-TGGCTGHCTCCAAATC (Motif 30)

A C G T A C T G A C T G A G T C A C G T A C T G G A C T A G T C A C G T A G T C A G T C G T C A C G T A C G T A A C G T G T A C
Reverse Opposite:
A C T G C G T A C G A T A C G T A C G T A C T G C T A G C G T A A C T G C A G T A G T C C G T A A C T G A G T C G T A C C G T A
p-value:1e-7
log p-value:-1.812e+01
Information Content per bp:1.856
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.2 +/- 21.3bp
Average Position of motif in Background68.6 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGHCTCCAAATC
CTGGCAGNCTGCCA---
 A C G T A C G T A C T G A C T G A G T C A C G T A C T G G A C T A G T C A C G T A G T C A G T C G T C A C G T A C G T A A C G T G T A C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGGCTGHCTCCAAATC
-TGCTGACTCA-----
 A C G T A C T G A C T G A G T C A C G T A C T G G A C T A G T C A C G T A G T C A G T C G T C A C G T A C G T A A C G T G T A C
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TGGCTGHCTCCAAATC
TAAAAATGCTGACTT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G G A C T A G T C A C G T A G T C A G T C G T C A C G T A C G T A A C G T G T A C
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGGCTGHCTCCAAATC
CTTGGCANNNTGCCAA--
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G G A C T A G T C A C G T A G T C A G T C G T C A C G T A C G T A A C G T G T A C
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGGCTGHCTCCAAATC
AAAATGCTGACT-------
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G G A C T A G T C A C G T A G T C A G T C G T C A C G T A C G T A A C G T G T A C
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGGCTGHCTCCAAATC
AATTTGCTGAC--------
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G G A C T A G T C A C G T A G T C A G T C G T C A C G T A C G T A A C G T G T A C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGHCTCCAAATC
CTGTCTGTCACCT----
 A C G T A C G T A C T G A C T G A G T C A C G T A C T G G A C T A G T C A C G T A G T C A G T C G T C A C G T A C G T A A C G T G T A C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TGGCTGHCTCCAAATC
AAATTTGCTGACTTAGA---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G G A C T A G T C A C G T A G T C A G T C G T C A C G T A C G T A A C G T G T A C
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTGHCTCCAAATC
TTGGCATGGTGCCA---
 A C G T A C G T A C T G A C T G A G T C A C G T A C T G G A C T A G T C A C G T A G T C A G T C G T C A C G T A C G T A A C G T G T A C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGGCTGHCTCCAAATC
-NGCTN----------
 A C G T A C T G A C T G A G T C A C G T A C T G G A C T A G T C A C G T A G T C A G T C G T C A C G T A C G T A A C G T G T A C
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T