Information for 11-KYAAATATARTKC (Motif 23)

A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A C T A G A C G T A C T G A G T C
Reverse Opposite:
C T A G G T A C C G T A A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T C T A G G T A C
p-value:1e-9
log p-value:-2.145e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 20.0bp
Average Position of motif in Background46.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0069.1_Sox21_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-KYAAATATARTKC--
NNTAATTATAATNANN
 A C G T A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A C T A G A C G T A C T G A G T C A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0064.1_Sox14_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-KYAAATATARTKC--
GCTAATTATAATTATC
 A C G T A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A C T A G A C G T A C T G A G T C A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-KYAAATATARTKC--
TATAATTATAATATTC
 A C G T A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A C T A G A C G T A C T G A G T C A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

FOXB1/MA0845.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---KYAAATATARTKC
TATGTAAATAT-----
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A C T A G A C G T A C T G A G T C
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---KYAAATATARTKC
TATGTAAATAT-----
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A C T A G A C G T A C T G A G T C
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-KYAAATATARTKC
DCYAAAAATAGM--
 A C G T A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A C T A G A C G T A C T G A G T C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----KYAAATATARTKC
GTCGGTAATTATNGNGN
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A C T A G A C G T A C T G A G T C
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---KYAAATATARTKC
WAAGTAAAYA------
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A C T A G A C G T A C T G A G T C
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----KYAAATATARTKC
NNNGGTAATTATNGNGN
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A C T A G A C G T A C T G A G T C
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-KYAAATATARTKC
GCTAAAAATAGC--
 A C G T A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A C T A G A C G T A C T G A G T C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T