Information for 7-TTATTAACCCAGA (Motif 17)

A C G T A C G T C G T A A C G T A G C T C G T A C G T A A G T C G A T C A G T C C G T A A C T G C G T A
Reverse Opposite:
C G A T A G T C A C G T C T A G C A T G A C T G A C G T A C G T C T G A C G T A A C G T C G T A G T C A
p-value:1e-10
log p-value:-2.485e+01
Information Content per bp:1.864
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 18.4bp
Average Position of motif in Background57.3 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0174.1_Vax1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TTATTAACCCAGA
ACGTTAATTAACCCAG-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G T A C G T A A G T C G A T C A G T C C G T A A C T G C G T A
T G C A T A G C T C A G C G A T G A C T G T C A G C T A C G A T C A G T C T G A T C G A A G T C G A T C G A T C C G T A C T A G A C G T

Hoxd3/MA0912.1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTATTAACCCAGA
ANGNTAATTANCNCAN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G T A C G T A A G T C G A T C A G T C C G T A A C T G C G T A
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A A C G T

PH0079.1_Hoxd3/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTATTAACCCAGA
ANGNTAATTANCNCAN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G T A C G T A A G T C G A T C A G T C C G T A A C T G C G T A
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTATTAACCCAGA
BSNTGTTTACWYWGN
 A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G T A C G T A A G T C G A T C A G T C C G T A A C T G C G T A
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTATTAACCCAGA
ATATTTACATA--
 A C G T A C G T C G T A A C G T A G C T C G T A C G T A A G T C G A T C A G T C C G T A A C T G C G T A
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTATTAACCCAGA
AATATTAATAAAGA
 A C G T A C G T A C G T C G T A A C G T A G C T C G T A C G T A A G T C G A T C A G T C C G T A A C T G C G T A
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTATTAACCCAGA
-TGTTTACTTAGG
 A C G T A C G T C G T A A C G T A G C T C G T A C G T A A G T C G A T C A G T C C G T A A C T G C G T A
A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

PB0109.1_Bbx_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTATTAACCCAGA
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G T A C G T A A G T C G A T C A G T C C G T A A C T G C G T A
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

PH0103.1_Meox1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTATTAACCCAGA
GAGGTAATTACCTCAG-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G T A C G T A A G T C G A T C A G T C C G T A A C T G C G T A
T C A G T G C A C A T G C A T G G A C T T G C A G C T A C A G T A C G T C T G A A T G C G T A C G A C T A G T C C G T A C T A G A C G T

PH0045.1_Hoxa1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTATTAACCCAGA
ACGGTAATTAGCTCAG-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G T A C G T A A G T C G A T C A G T C C G T A A C T G C G T A
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G A C G T