Information for 9-GWCATCAATATCCTCC (Motif 10)

A C T G C G T A G A T C C T G A A C G T A G T C C T G A C T G A C G A T T C G A A C G T G T A C G T A C A C G T G T A C G T A C
Reverse Opposite:
A C T G A C T G C G T A A C T G A C T G G T C A A G C T C G T A A G C T A G C T C T A G T C G A A G C T C T A G C G A T A G T C
p-value:1e-11
log p-value:-2.692e+01
Information Content per bp:1.745
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 31.3bp
Average Position of motif in Background23.9 +/- 1.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GWCATCAATATCCTCC
HNRAATCAAT-------
 A C G T A C T G C G T A G A T C C T G A A C G T A G T C C T G A C T G A C G A T T C G A A C G T G T A C G T A C A C G T G T A C G T A C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GWCATCAATATCCTCC--
---AGAAATGACTTCCCT
 A C T G C G T A G A T C C T G A A C G T A G T C C T G A C T G A C G A T T C G A A C G T G T A C G T A C A C G T G T A C G T A C A C G T A C G T
A C G T A C G T A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GWCATCAATATCCTCC
GTAAACAAT-------
 A C T G C G T A G A T C C T G A A C G T A G T C C T G A C T G A C G A T T C G A A C G T G T A C G T A C A C G T G T A C G T A C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GWCATCAATATCCTCC
AAGTCAGCANTTTTN---
 A C G T A C G T A C T G C G T A G A T C C T G A A C G T A G T C C T G A C T G A C G A T T C G A A C G T G T A C G T A C A C G T G T A C G T A C
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GWCATCAATATCCTCC
---AACAAT-------
 A C T G C G T A G A T C C T G A A C G T A G T C C T G A C T G A C G A T T C G A A C G T G T A C G T A C A C G T G T A C G T A C
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GWCATCAATATCCTCC
NCTANGTCAGCAAATTT----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A G A T C C T G A A C G T A G T C C T G A C T G A C G A T T C G A A C G T G T A C G T A C A C G T G T A C G T A C
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GWCATCAATATCCTCC
--NAACAAT-------
 A C T G C G T A G A T C C T G A A C G T A G T C C T G A C T G A C G A T T C G A A C G T G T A C G T A C A C G T G T A C G T A C
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GWCATCAATATCCTCC
-TAATCGATAA-----
 A C T G C G T A G A T C C T G A A C G T A G T C C T G A C T G A C G A T T C G A A C G T G T A C G T A C A C G T G T A C G T A C
A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A A C G T A C G T A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GWCATCAATATCCTCC
GAAGATCAATCACTTA-
 A C G T A C T G C G T A G A T C C T G A A C G T A G T C C T G A C T G A C G A T T C G A A C G T G T A C G T A C A C G T G T A C G T A C
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GWCATCAATATCCTCC
NGTCAGCANTTT-----
 A C G T A C T G C G T A G A T C C T G A A C G T A G T C C T G A C T G A C G A T T C G A A C G T G T A C G T A C A C G T G T A C G T A C
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T