Information for 17-GACAGTGGAA (Motif 30)

A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C C G T A A G T C A C G T A C T G A C G T A G T C
p-value:1e-1
log p-value:-3.907e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.0 +/- 24.5bp
Average Position of motif in Background74.5 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GACAGTGGAA
---AGAGGAA
 A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A C G T A
A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GACAGTGGAA---
---AATGGAAAAT
 A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GACAGTGGAA---
---NNTGGAAANN
 A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GACAGTGGAA--
GAAAGTGAAAGT
 A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A C G T A A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GACAGTGGAA---
---AATGGAAAAT
 A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GACAGTGGAA
----GTGGAT
 A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A C G T A
A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GACAGTGGAA
TGGCAGTTGN-
 A C G T A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A C G T A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GACAGTGGAA-------
GGAAAGCGAAACCAAAAC
 A C G T A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GACAGTGGAA
GACAATGNN-
 A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A C G T A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GACAGTGGAA--
-----TGGAAAA
 A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A