Information for 21-CAGTACTGTTTGG (Motif 28)

A G T C C G T A A C T G A C G T C G T A A G T C A C G T A T C G A G C T A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A C T G A T A G C C G T A A C T G A C G T C G T A A G T C A C G T A C T G
p-value:1e-2
log p-value:-5.508e+00
Information Content per bp:1.953
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CAGTACTGTTTGG-
NNGTANTGTTTTNC
 A G T C C G T A A C T G A C G T C G T A A G T C A C G T A T C G A G C T A C G T A C G T A C T G A C T G A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAGTACTGTTTGG----
AGAGTGCTGATTGGTCCA
 A C G T A G T C C G T A A C T G A C G T C G T A A G T C A C G T A T C G A G C T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CAGTACTGTTTGG-------
-----CTGATTGGTCNATTT
 A G T C C G T A A C T G A C G T C G T A A G T C A C G T A T C G A G C T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGTACTGTTTGG-----
-NNCTTTGTTTTGNTNNN
 A G T C C G T A A C T G A C G T C G T A A G T C A C G T A T C G A G C T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGTACTGTTTGG-----
-NNTNNTGTCTGGNNTNG
 A G T C C G T A A C T G A C G T C G T A A G T C A C G T A T C G A G C T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CAGTACTGTTTGG
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T C G T A A G T C A C G T A T C G A G C T A C G T A C G T A C T G A C T G
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CAGTACTGTTTGG--
-----CCGATTGGCT
 A G T C C G T A A C T G A C G T C G T A A G T C A C G T A T C G A G C T A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTACTGTTTGG
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T C G T A A G T C A C G T A T C G A G C T A C G T A C G T A C T G A C T G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CAGTACTGTTTGG-----
------TGATTGGCTANN
 A G T C C G T A A C T G A C G T C G T A A G T C A C G T A T C G A G C T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGTACTGTTTGG--
VAGRACAKNCTGTBC
 A G T C C G T A A C T G A C G T C G T A A G T C A C G T A T C G A G C T A C G T A C G T A C T G A C T G A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C